Transcript Information: R_Transcript_149047.p1


Annotated TAIR IDAT1G73220.1
Annotated Gene Nameorganic cation/carnitine transporter1
Annotated Gene Symbol(s)AtOCT1, 1-Oct
Annotation TypeOrtholog
Chromosome Positionchr1:27538387-27540109 | Forward length=539
E-Value1.7E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1855002712269
Replicate 21.0736744531061
Replicate 32.4728864450392
Condition 2: 8 Hour
Replicate 11.9477392571672
Replicate 21.6516560450876
Replicate 33.7128294450792
Condition 3: 24 Hour
Replicate 13.7828205091103
Replicate 22.3809654484146
Replicate 34.1039446287932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149047.p1 GENE.R_Transcript_149047~~R_Transcript_149047.p1 ORF type:complete len:176 (-),score=19.15,Sugar_tr|PF00083.20|1.8e-16,MFS_1|PF07690.12|2.4e-13 R_Transcript_149047:60-587(-)
ATGTGCGCAGGATCAGTTGTCTATGGGCGTCTAGCTGATGCATATTTAGGAAGAAAGAAAACAATGATGTTGTCATGCGTTCTAACAAGCATAACTGCTTTGCTAACATTATTTTCGCCAAACATTTGGATATATGCAATGCTTCGTTTCTCAAATGGGTTTGCCAGATCAGGAATTGGAATCTGCTGCCTAGTTCTTTCAACTGAAGTTGTAGGTAGGAAATGGCAAGGCCAAGTGGGGCAATATGGGTTCTTCTTCTTCACTGTAGGCTGCATTTCCATGCCTTTGGTTGCTTATCCTACCAGAAAATCTTGGAGAACTCTTCACCAAATCATCTCCGGTATTCCCTTTGTGTATTCCATTTTTGTCCACTTCTTGGTGGCTGAGTCCCCTCGTTGGCTTCTCATTAAAGGCCGAAAAACGGAAGCACTTGCGATTTTGGCAAATTTTGCCAAAAGAAATCATGGTAAAGAACTCCCAGTGAGCCTCCAACTCTCTGATCCAACCACTTTGCATCGATTGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149047.p1 GENE.R_Transcript_149047~~R_Transcript_149047.p1 ORF type:complete len:176 (-),score=19.15,Sugar_tr|PF00083.20|1.8e-16,MFS_1|PF07690.12|2.4e-13 R_Transcript_149047:60-587(-)
MCAGSVVYGRLADAYLGRKKTMMLSCVLTSITALLTLFSPNIWIYAMLRFSNGFARSGIGICCLVLSTEVVGRKWQGQVGQYGFFFFTVGCISMPLVAYPTRKSWRTLHQIISGIPFVYSIFVHFLVAESPRWLLIKGRKTEALAILANFAKRNHGKELPVSLQLSDPTTLHRLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST