Transcript Information: R_Transcript_149079.p1


Annotated TAIR IDAT5G44310.2
Annotated Gene NameLate embryogenesis abundant protein (LEA) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17847998-17849436 | Reverse length=331
E-Value3.5E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89768660433043
Replicate 20.27536131693506
Replicate 31.0514568076922
Condition 2: 8 Hour
Replicate 11.2845043906752
Replicate 22.7126315676192
Replicate 34.2849703759602
Condition 3: 24 Hour
Replicate 11.7312444794662
Replicate 21.8801204300164
Replicate 31.6505482222906


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149079.p1 GENE.R_Transcript_149079~~R_Transcript_149079.p1 ORF type:complete len:305 (+),score=92.16,LEA_4|PF02987.12|14,LEA_4|PF02987.12|1.9e+03,LEA_4|PF02987.12|3.6e-06,LEA_4|PF02987.12|0.12,LEA_4|PF02987.12|16,LEA_4|PF02987.12|5.2e-05,LEA_4|PF02987.12|0.96,DUF883|PF05957.9|6.8,DUF883|PF05957.9|0.024,DUF883|PF05957.9|0.67,DUF883|PF05957.9|1.3,DUF883|PF05957.9|13,DUF883|PF05957.9|0.14 R_Transcript_149079:39-953(+)
ATGGGCTCAGTTAGGCTACTGGCGGTGGTTGTAGTGGCGGTGGCGGTGGTGTTGCCGCTGGTAGTGGCGAACTACACGATGGCGTCAGAGGTAGCGACGGCAGCAAAAGAGCAGGTGAAGGGGAATACAGGGAGGGCGTCGGAGAGTGCGAAGCAGGTGGGAAAGGAGGTCAAGGAGGCGGCCGAGTCGTGGACGGGCTGGGCCAAAGAGAAGATCCAGGAAGGACTCGGGTTGAAACATGGAGATCATCAAGAGGATGTTGGAGATAAGTCTAAGGATAAGATTCATGAAGTTGTTTCTGGAACAGGAGAGTATACAGCTGATAAGGCAGGAGAAGCAAAAGACGAGGCATGCGAGATGGCAAGCGAAGCATCCAACAAAGCATATGAGACGGCCCAACAAGCCAAGGGAAAGGCATCTGAAGTGGCTAACGAAGCAGCCCACAAAGCCGGATCAGCAAGAGACAAGGCCTATGAAACAGCAGAGGAGACTACCCAAAAATCCTGGGACACGGCCCAAGCAGCCAAGGGCAAGGCCTACGAAGCCGCTACCGAAGCGGCCAACAAGGCCCAAGTGGTGAAGGAAAAGGCTCAAGAGCAGGCCCAAGAAGCCTCCAAGAAGGCGTCCGACATCAAGGGAAAAGCCCAACAAGGGATGGAAGCGACAGCCCACAAGGCCGAGGAGGCCAAGGAGACGGTAGCCCAAAAGGCGGAAGAGGCCAAGGAGAGGGCAGCTCAATGGGGAAAGACGGTGGCGGAGGAAGGGAAAAAGAAGGGGGCTGAGGCTGGAGAGACATTGAATTGGGCCAAAGAGAAGGCTAAAGAAGGGTATGATGCTGCTAAGGAGAAGGCTAGTGACACTTTGCATAGTGCCAAGGAGAAGGTCACTGGGTCTCCTCGTGGCGAGGAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149079.p1 GENE.R_Transcript_149079~~R_Transcript_149079.p1 ORF type:complete len:305 (+),score=92.16,LEA_4|PF02987.12|14,LEA_4|PF02987.12|1.9e+03,LEA_4|PF02987.12|3.6e-06,LEA_4|PF02987.12|0.12,LEA_4|PF02987.12|16,LEA_4|PF02987.12|5.2e-05,LEA_4|PF02987.12|0.96,DUF883|PF05957.9|6.8,DUF883|PF05957.9|0.024,DUF883|PF05957.9|0.67,DUF883|PF05957.9|1.3,DUF883|PF05957.9|13,DUF883|PF05957.9|0.14 R_Transcript_149079:39-953(+)
MGSVRLLAVVVVAVAVVLPLVVANYTMASEVATAAKEQVKGNTGRASESAKQVGKEVKEAAESWTGWAKEKIQEGLGLKHGDHQEDVGDKSKDKIHEVVSGTGEYTADKAGEAKDEACEMASEASNKAYETAQQAKGKASEVANEAAHKAGSARDKAYETAEETTQKSWDTAQAAKGKAYEAATEAANKAQVVKEKAQEQAQEASKKASDIKGKAQQGMEATAHKAEEAKETVAQKAEEAKERAAQWGKTVAEEGKKKGAEAGETLNWAKEKAKEGYDAAKEKASDTLHSAKEKVTGSPRGEEL*

Click here to download the sequence:
Link to NCBI Protein BLAST