Transcript Information: R_Transcript_149176.p1


Annotated TAIR IDAT2G39090.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)APC7, AtAPC7
Annotation TypeOrtholog
Chromosome Positionchr2:16312771-16317233 | Reverse length=558
E-Value1.3E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.7443218853
Replicate 211.374549959096
Replicate 315.745839164673
Condition 2: 8 Hour
Replicate 111.873252452217
Replicate 213.62305945209
Replicate 319.828135935236
Condition 3: 24 Hour
Replicate 119.328597914621
Replicate 214.925494915293
Replicate 321.926581604636


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149176.p1 GENE.R_Transcript_149176~~R_Transcript_149176.p1 ORF type:complete len:563 (+),score=137.93,TPR_11|PF13414.2|0.00033,TPR_11|PF13414.2|76,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|2e+02,TPR_11|PF13414.2|0.00034,TPR_11|PF13414.2|0.0053,TPR_11|PF13414.2|0.17,TPR_2|PF07719.13|0.016,TPR_2|PF07719.13|2.2e+03,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.74,TPR_2|PF07719.13|3.4,TPR_2|PF07719.13|0.067,TPR_2|PF07719.13|4.3e+02,TPR_2|PF07719.13|2.3,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.00058,TPR_16|PF13432.2|3.2,TPR_16|PF13432.2|3.6e+03,TPR_16|PF13432.2|4.5e+02,TPR_16|PF13432.2|0.003,TPR_16|PF13432.2|0.015,TPR_16|PF13432.2|8.8,TPR_16|PF13432.2|0.00022,TPR_16|PF13432.2|0.23,TPR_1|PF00515.24|0.12,TPR_1|PF00515.24|4.8e+03,TPR_1|PF00515.24|25,TPR_1|PF00515.24|47,TPR_1|PF00515.24|0.32,TPR_1|PF00515.24|0.026,TPR_1|PF00515.24|3.4,TPR_1|PF00515.24|0.0022,TPR_14|PF13428.2|3.8,TPR_14|PF13428.2|0.13,TPR_14|PF13428.2|0.16,TPR_14|PF13428.2|21,TPR_14|PF13428.2|3e+03,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|17,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|4.2,TPR_14|PF13428.2|0.076,TPR_14|PF13428.2|0.022,TPR_8|PF13181.2|0.45,TPR_8|PF13181.2|2.8e+03,TPR_8|PF13181.2|0.14,TPR_8|PF13181.2|8.1e+03,TPR_8|PF13181.2|4.5,TPR_8|PF13181.2|1.2e+04,TPR_8|PF13181.2|4.3,TPR_8|PF13181.2|1.3e+04,TPR_8|PF13181.2|16,TPR_8|PF13181.2|0.021,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|29,TPR_19|PF14559.2|0.039,TPR_19|PF14559.2|24,TPR_19|PF14559.2|1.4e+02,TPR_19|PF14559.2|1.9e-05,TPR_19|PF14559.2|0.18,TPR_12|PF13424.2|0.14,TPR_12|PF13424.2|3.4e+02,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|0.024,TPR_12|PF13424.2|0.061,TPR_12|PF13424.2|6.2e+02,TPR_12|PF13424.2|2.7e+02,TPR_12|PF13424.2|0.094,TPR_12|PF13424.2|2.1,TPR_12|PF13424.2|0.32,TPR_7|PF13176.2|0.00022,TPR_7|PF13176.2|1.5e+03,TPR_7|PF13176.2|7.5,TPR_7|PF13176.2|1e+04,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|55,TPR_7|PF13176.2|0.55,TPR_17|PF13431.2|6.5e+02,TPR_17|PF13431.2|5.6e+02,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|2.8e+02,TPR_17|PF13431.2|4.9e+02,TPR_17|PF13431.2|74,TPR_17|PF13431.2|1.2e+03,TPR_17|PF13431.2|5.9e+02,TPR_6|PF13174.2|5.5,TPR_6|PF13174.2|6e+02,TPR_6|PF13174.2|13,TPR_6|PF13174.2|2.9,TPR_6|PF13174.2|6.8e+03,TPR_6|PF13174.2|1.9e+03,TPR_6|PF13174.2|5.9e+02,TPR_6|PF13174.2|1.4e+02,TPR_6|PF13174.2|91 R_Transcript_149176:133-1821(+)
ATGGACGTTCCAAAAGACCATATGTCTACTCTCCTCGATCATGGTCTTTACAATTCAGCTAAACTTCTGGGCTATTTCCTTGTTTCTTCGTCTTCTTTAAATGCCGAAATTAATCCCAATGCCAAGGCCGAAAATTTGGTGCTTCTTGGAGATGCATTGTTTCGGGAAAGGGAATATCGGCGAGCGATTAGTACATATAAACAGGCCTTGCAATTTCACAAGATCATCCCAAAGCAAAGCACTCCTACACTAAGAAGTTCATTGTCTACACCAAGCAGGTCTTCTTCTCCAAGTTCTGTTAATATTTCAGCGATTAATGAAAATGAGGTCAAATTCAAAATTGCATCCTGTCATGCTGCGCTGAATGAGAACCAAGCTGCTATCTTGGAGATGGAGGGAATCCCTAGCAAGTTAAGAAATTTGCCGATGCATCTAATGATGGGAAAGCTTTATCGAAATACTCGACATACTCGTGCGGCTGCTGCGAGTTACAAAGAGTGTTTGAGACATTGTCCCTATTTGCTCGAGGCTATAAGTGCTCTGGCTGAGCTTGGAGCTTCTGTTAAGGAAATTATTTCCTTGTTTCCTCAGATACTAAGTAGAAGCACGAGGCCTCTCTCTGATCATCTTGAATCTGGCCGCTGGCTACAGCGTTATGTTGAGGCCCAGTGTTGTCTTGCATCAAATGATTACAAAGGTGGGTTAGAAATGTTCACAGAACTTTTACAGAGGTTCCCGAATAATGTGCAATTATTACTTGAAATTGCAAAGGTTGAGGCCATAATTGGAAAGAATGACGAAGCTATAGTGAACTTCGAGAAGGCACGTTCTATTGATCCATATATGGTTACATATATGGATGAGTATGCAATGCTTCTCAAGAATAAATCTGATTATGGAAAGCTAAACAAATTGGTGCATGACTTGTTGAACATTGATCCTACAAGACCAGAAGTATTCGTTGCTTTGTCAGTGTTGTGGCAAAGAAAAGATGAGAGAGGAGCTCTGTCTTATGCAGAAAAGCAGAGTATTCAAATTGACGAAAGGCGCGTAACTGGTCATATCATGAAGGGAAACTTGCTTTTGTTACTGAATAGACCAGATGCAGCCGCTGGTGCCTTCAGAAATGCTCAGGAACTTAAACCTGATCTTCGTTCTTATCAAGGCTTAGTTCATTCCTATTTGGCAATTTCGAAGGTCAAAGAAGCTTTATATATTGCCAGAGAGGCAATGAAGATAATGCCTCAATCTGCAAAGGCTTTGAAGTTAGTTGGAGATGTGCATGCTAAAAGTACCAGTGGGAGGGAAAAGGCAAAGAAGTTCTATGAATCTGCTCTCAGATTGGAACCTGGTTACCTTGGGGCTGCATTGGCACTTGCTGAACTTCATGTAGTCGAGGGTCGAAATGGTGATGCTGTATCTCTTCTTGAGCGTTACCTTAAAGATTGGGCTGATGATTCTCTCCACGTCAAGCTTGCTCAAGTTTTCGCTGCCACTAATATGTTGCAGGAGGCATTGTCTCATTATCAGGCTGCATTGAGGATGAACCCACAGAATGAAGCTGCAAAGAAAGGGTTAGAGCGTTTGGAGAAACAAATGAAGGGAGTTGATCCAGATGCACCTGATGAAGATGAAGAGACTGAGGTTGATGATGGTGATGGGGACCAGGAGGAAACGGAGCTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149176.p1 GENE.R_Transcript_149176~~R_Transcript_149176.p1 ORF type:complete len:563 (+),score=137.93,TPR_11|PF13414.2|0.00033,TPR_11|PF13414.2|76,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|2e+02,TPR_11|PF13414.2|0.00034,TPR_11|PF13414.2|0.0053,TPR_11|PF13414.2|0.17,TPR_2|PF07719.13|0.016,TPR_2|PF07719.13|2.2e+03,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.74,TPR_2|PF07719.13|3.4,TPR_2|PF07719.13|0.067,TPR_2|PF07719.13|4.3e+02,TPR_2|PF07719.13|2.3,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.00058,TPR_16|PF13432.2|3.2,TPR_16|PF13432.2|3.6e+03,TPR_16|PF13432.2|4.5e+02,TPR_16|PF13432.2|0.003,TPR_16|PF13432.2|0.015,TPR_16|PF13432.2|8.8,TPR_16|PF13432.2|0.00022,TPR_16|PF13432.2|0.23,TPR_1|PF00515.24|0.12,TPR_1|PF00515.24|4.8e+03,TPR_1|PF00515.24|25,TPR_1|PF00515.24|47,TPR_1|PF00515.24|0.32,TPR_1|PF00515.24|0.026,TPR_1|PF00515.24|3.4,TPR_1|PF00515.24|0.0022,TPR_14|PF13428.2|3.8,TPR_14|PF13428.2|0.13,TPR_14|PF13428.2|0.16,TPR_14|PF13428.2|21,TPR_14|PF13428.2|3e+03,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|17,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|4.2,TPR_14|PF13428.2|0.076,TPR_14|PF13428.2|0.022,TPR_8|PF13181.2|0.45,TPR_8|PF13181.2|2.8e+03,TPR_8|PF13181.2|0.14,TPR_8|PF13181.2|8.1e+03,TPR_8|PF13181.2|4.5,TPR_8|PF13181.2|1.2e+04,TPR_8|PF13181.2|4.3,TPR_8|PF13181.2|1.3e+04,TPR_8|PF13181.2|16,TPR_8|PF13181.2|0.021,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|29,TPR_19|PF14559.2|0.039,TPR_19|PF14559.2|24,TPR_19|PF14559.2|1.4e+02,TPR_19|PF14559.2|1.9e-05,TPR_19|PF14559.2|0.18,TPR_12|PF13424.2|0.14,TPR_12|PF13424.2|3.4e+02,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|0.024,TPR_12|PF13424.2|0.061,TPR_12|PF13424.2|6.2e+02,TPR_12|PF13424.2|2.7e+02,TPR_12|PF13424.2|0.094,TPR_12|PF13424.2|2.1,TPR_12|PF13424.2|0.32,TPR_7|PF13176.2|0.00022,TPR_7|PF13176.2|1.5e+03,TPR_7|PF13176.2|7.5,TPR_7|PF13176.2|1e+04,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|55,TPR_7|PF13176.2|0.55,TPR_17|PF13431.2|6.5e+02,TPR_17|PF13431.2|5.6e+02,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|2.8e+02,TPR_17|PF13431.2|4.9e+02,TPR_17|PF13431.2|74,TPR_17|PF13431.2|1.2e+03,TPR_17|PF13431.2|5.9e+02,TPR_6|PF13174.2|5.5,TPR_6|PF13174.2|6e+02,TPR_6|PF13174.2|13,TPR_6|PF13174.2|2.9,TPR_6|PF13174.2|6.8e+03,TPR_6|PF13174.2|1.9e+03,TPR_6|PF13174.2|5.9e+02,TPR_6|PF13174.2|1.4e+02,TPR_6|PF13174.2|91 R_Transcript_149176:133-1821(+)
MDVPKDHMSTLLDHGLYNSAKLLGYFLVSSSSLNAEINPNAKAENLVLLGDALFREREYRRAISTYKQALQFHKIIPKQSTPTLRSSLSTPSRSSSPSSVNISAINENEVKFKIASCHAALNENQAAILEMEGIPSKLRNLPMHLMMGKLYRNTRHTRAAAASYKECLRHCPYLLEAISALAELGASVKEIISLFPQILSRSTRPLSDHLESGRWLQRYVEAQCCLASNDYKGGLEMFTELLQRFPNNVQLLLEIAKVEAIIGKNDEAIVNFEKARSIDPYMVTYMDEYAMLLKNKSDYGKLNKLVHDLLNIDPTRPEVFVALSVLWQRKDERGALSYAEKQSIQIDERRVTGHIMKGNLLLLLNRPDAAAGAFRNAQELKPDLRSYQGLVHSYLAISKVKEALYIAREAMKIMPQSAKALKLVGDVHAKSTSGREKAKKFYESALRLEPGYLGAALALAELHVVEGRNGDAVSLLERYLKDWADDSLHVKLAQVFAATNMLQEALSHYQAALRMNPQNEAAKKGLERLEKQMKGVDPDAPDEDEETEVDDGDGDQEETELL*

Click here to download the sequence:
Link to NCBI Protein BLAST