Transcript Information: R_Transcript_149177.p1


Annotated TAIR IDAT2G39090.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)APC7, AtAPC7
Annotation TypeHomolog
Chromosome Positionchr2:16312771-16317233 | Reverse length=558
E-Value4E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1811714348406
Replicate 22.1788613639555
Replicate 31.6567766185896
Condition 2: 8 Hour
Replicate 13.3109817381495
Replicate 22.2501516318174
Replicate 32.5115436078523
Condition 3: 24 Hour
Replicate 13.0321632187534
Replicate 22.4274656011642
Replicate 32.6155118808242


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149177.p1 GENE.R_Transcript_149177~~R_Transcript_149177.p1 ORF type:complete len:318 (+),score=45.41,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|0.06,TPR_14|PF13428.2|0.091,TPR_11|PF13414.2|0.00013,TPR_11|PF13414.2|34,TPR_11|PF13414.2|0.2,TPR_2|PF07719.13|0.0075,TPR_2|PF07719.13|1.1e+03,TPR_2|PF07719.13|0.53,TPR_2|PF07719.13|0.35,TPR_7|PF13176.2|0.0001,TPR_7|PF13176.2|7.5e+02,TPR_7|PF13176.2|3.6,TPR_7|PF13176.2|5.7e+03,TPR_6|PF13174.2|2.7,TPR_6|PF13174.2|3e+02,TPR_6|PF13174.2|6.3,TPR_6|PF13174.2|1.4,TPR_8|PF13181.2|0.21,TPR_8|PF13181.2|1.4e+03,TPR_8|PF13181.2|0.067,TPR_8|PF13181.2|3.9e+03 R_Transcript_149177:133-1086(+)
ATGGACGTTCCAAAAGACCATATGTCTACTCTCCTCGATCATGGTCTTTACAATTCAGCTAAACTTCTGGGCTATTTCCTTGTTTCTTCGTCTTCTTTAAATGCCGAAATTAATCCCAATGCCAAGGCCGAAAATTTGGTGCTTCTTGGAGATGCATTGTTTCGGGAAAGGGAATATCGGCGAGCGATTAGTACATATAAACAGGCCTTGCAATTTCACAAGATCATCCCAAAGCAAAGCACTCCTACACTAAGAAGTTCATTGTCTACACCAAGCAGGTCTTCTTCTCCAAGTTCTGTTAATATTTCAGCGATTAATGAAAATGAGGTCAAATTCAAAATTGCATCCTGTCATGCTGCGCTGAATGAGAACCAAGCTGCTATCTTGGAGATGGAGGGAATCCCTAGCAAGTTAAGAAATTTGCCGATGCATCTAATGATGGGAAAGCTTTATCGAAATACTCGACATACTCGTGCGGCTGCTGCGAGTTACAAAGAGTGTTTGAGACATTGTCCCTATTTGCTCGAGGCTATAAGTGCTCTGGCTGAGCTTGGAGCTTCTGTTAAGGAAATTATTTCCTTGTTTCCTCAGATACTAAGTAGAAGCACGAGGCCTCTCTCTGATCATCTTGAATCTGGCCGCTGGCTACAGCGTTATGTTGAGGCCCAGTGTTGTCTTGCATCAAATGATTACAAAGGTGGGTTAGAAATGTTCACAGAACTTTTACAGAGGTTCCCGAATAATGTGCAATTATTACTTGAAATTGCAAAGAGCAAGGTTACTCAGACATGGCACCTACCCCGGCTTGTTGCATGTCAACACAACACCCTGGTCGGTAAGACACAAGACACGCCTGGGATACGGCATAGTCATGGACGACACGACTGTTTGGGGAGGGAGAGGCAGAGGAAGAGGGAGAAGGAGAGATGCAACAAAATTGGTACCAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149177.p1 GENE.R_Transcript_149177~~R_Transcript_149177.p1 ORF type:complete len:318 (+),score=45.41,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|0.06,TPR_14|PF13428.2|0.091,TPR_11|PF13414.2|0.00013,TPR_11|PF13414.2|34,TPR_11|PF13414.2|0.2,TPR_2|PF07719.13|0.0075,TPR_2|PF07719.13|1.1e+03,TPR_2|PF07719.13|0.53,TPR_2|PF07719.13|0.35,TPR_7|PF13176.2|0.0001,TPR_7|PF13176.2|7.5e+02,TPR_7|PF13176.2|3.6,TPR_7|PF13176.2|5.7e+03,TPR_6|PF13174.2|2.7,TPR_6|PF13174.2|3e+02,TPR_6|PF13174.2|6.3,TPR_6|PF13174.2|1.4,TPR_8|PF13181.2|0.21,TPR_8|PF13181.2|1.4e+03,TPR_8|PF13181.2|0.067,TPR_8|PF13181.2|3.9e+03 R_Transcript_149177:133-1086(+)
MDVPKDHMSTLLDHGLYNSAKLLGYFLVSSSSLNAEINPNAKAENLVLLGDALFREREYRRAISTYKQALQFHKIIPKQSTPTLRSSLSTPSRSSSPSSVNISAINENEVKFKIASCHAALNENQAAILEMEGIPSKLRNLPMHLMMGKLYRNTRHTRAAAASYKECLRHCPYLLEAISALAELGASVKEIISLFPQILSRSTRPLSDHLESGRWLQRYVEAQCCLASNDYKGGLEMFTELLQRFPNNVQLLLEIAKSKVTQTWHLPRLVACQHNTLVGKTQDTPGIRHSHGRHDCLGRERQRKREKERCNKIGTRK*

Click here to download the sequence:
Link to NCBI Protein BLAST