Transcript Information: R_Transcript_149180.p1


Annotated TAIR IDAT2G39090.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)APC7, AtAPC7
Annotation TypeOrtholog
Chromosome Positionchr2:16312771-16317233 | Reverse length=558
E-Value2.1E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.912080089556
Replicate 235.914724396299
Replicate 336.771341930666
Condition 2: 8 Hour
Replicate 134.40908389955
Replicate 241.779542387478
Replicate 330.762203261919
Condition 3: 24 Hour
Replicate 138.424119465315
Replicate 238.538662903535
Replicate 342.047432687987


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149180.p1 GENE.R_Transcript_149180~~R_Transcript_149180.p1 ORF type:complete len:190 (+),score=70.56,TPR_16|PF13432.2|1.6,TPR_16|PF13432.2|4.3e-05,TPR_16|PF13432.2|0.037,TPR_19|PF14559.2|33,TPR_19|PF14559.2|3.4e-06,TPR_19|PF14559.2|0.04,TPR_2|PF07719.13|1.1e+02,TPR_2|PF07719.13|0.58,TPR_2|PF07719.13|7.3e+02,TPR_2|PF07719.13|0.00013,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|0.016,TPR_14|PF13428.2|0.0042,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.9,TPR_1|PF00515.24|0.0005,TPR_12|PF13424.2|0.022,TPR_12|PF13424.2|0.34,TPR_12|PF13424.2|0.066,TPR_11|PF13414.2|3.2e+02,TPR_11|PF13414.2|0.00086,TPR_11|PF13414.2|0.036,TPR_8|PF13181.2|7.6e+03,TPR_8|PF13181.2|3.5,TPR_8|PF13181.2|6.5e+03,TPR_8|PF13181.2|0.0046,TPR_7|PF13176.2|38,TPR_7|PF13176.2|12,TPR_7|PF13176.2|0.12 R_Transcript_149180:324-893(+)
ATGTATTTGGTTCAATATCTGCAATTGCTGAATATTGTTTCTGCAGGCTTAGTTCATTCCTATTTGGCAATTTCGAAGGTCAAAGAAGCTTTATATATTGCCAGAGAGGCAATGAAGATAATGCCTCAATCTGCAAAGGCTTTGAAGTTAGTTGGAGATGTGCATGCTAAAAGTACCAGTGGGAGGGAAAAGGCAAAGAAGTTCTATGAATCTGCTCTCAGATTGGAACCTGGTTACCTTGGGGCTGCATTGGCACTTGCTGAACTTCATGTAGTCGAGGGTCGAAATGGTGATGCTGTATCTCTTCTTGAGCGTTACCTTAAAGATTGGGCTGATGATTCTCTCCACGTCAAGCTTGCTCAAGTTTTCGCTGCCACTAATATGTTGCAGGAGGCATTGTCTCATTATCAGGCTGCATTGAGGATGAACCCACAGAATGAAGCTGCAAAGAAAGGGTTAGAGCGTTTGGAGAAACAAATGAAGGGAGTTGATCCAGATGCACCTGATGAAGATGAAGAGACTGAGGTTGATGATGGTGATGGGGACCAGGAGGAAACGGAGCTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149180.p1 GENE.R_Transcript_149180~~R_Transcript_149180.p1 ORF type:complete len:190 (+),score=70.56,TPR_16|PF13432.2|1.6,TPR_16|PF13432.2|4.3e-05,TPR_16|PF13432.2|0.037,TPR_19|PF14559.2|33,TPR_19|PF14559.2|3.4e-06,TPR_19|PF14559.2|0.04,TPR_2|PF07719.13|1.1e+02,TPR_2|PF07719.13|0.58,TPR_2|PF07719.13|7.3e+02,TPR_2|PF07719.13|0.00013,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|0.016,TPR_14|PF13428.2|0.0042,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.9,TPR_1|PF00515.24|0.0005,TPR_12|PF13424.2|0.022,TPR_12|PF13424.2|0.34,TPR_12|PF13424.2|0.066,TPR_11|PF13414.2|3.2e+02,TPR_11|PF13414.2|0.00086,TPR_11|PF13414.2|0.036,TPR_8|PF13181.2|7.6e+03,TPR_8|PF13181.2|3.5,TPR_8|PF13181.2|6.5e+03,TPR_8|PF13181.2|0.0046,TPR_7|PF13176.2|38,TPR_7|PF13176.2|12,TPR_7|PF13176.2|0.12 R_Transcript_149180:324-893(+)
MYLVQYLQLLNIVSAGLVHSYLAISKVKEALYIAREAMKIMPQSAKALKLVGDVHAKSTSGREKAKKFYESALRLEPGYLGAALALAELHVVEGRNGDAVSLLERYLKDWADDSLHVKLAQVFAATNMLQEALSHYQAALRMNPQNEAAKKGLERLEKQMKGVDPDAPDEDEETEVDDGDGDQEETELL*

Click here to download the sequence:
Link to NCBI Protein BLAST