Transcript Information: R_Transcript_149678.p1


Annotated TAIR IDAT1G01350.1
Annotated Gene NameZinc finger (CCCH-type/C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:136732-137970 | Forward length=343
E-Value2.6E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.772354152617
Replicate 211.351658355153
Replicate 312.291420173545
Condition 2: 8 Hour
Replicate 113.437364910074
Replicate 213.361990368513
Replicate 317.93024951526
Condition 3: 24 Hour
Replicate 117.078368791341
Replicate 216.944894025687
Replicate 317.172060994192


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149678.p1 GENE.R_Transcript_149678~~R_Transcript_149678.p1 ORF type:5prime_partial len:246 (-),score=60.38,zf-CCCH|PF00642.20|3.1e-10,zf-CCCH|PF00642.20|7.2e+03,zf-C3HC4_3|PF13920.2|4.5e-09,zf-RING_5|PF14634.2|9e-06 R_Transcript_149678:78-815(-)
GAACTATTTCAGTTTGAATCTTCTAAGTTGATACAGGTACAGAATGACAGCAAAGCAACCGCCACACTGGAAACTGAGACAGATTTCTCAAGAGATGCCAGGGCTATCCGAGAGAGAGCCCTAAAGCAGGCAGAAGAGGCCTTGAAGGGCAATAAAAAGGCCTCTGGTGATGATAAGTTGTATAAGGGTATCCATGGTTATACTGATTACAAGGCAGGGTTTCGTCGAGAGCTAACCATTGCGTCCGAAAAAGCTGGGGGCTCTCATGGTCCTCTCAGGGCCTCTGCTCATATTAGGGTTTCAGCTAGATTTGACTACCAGCCTGATATTTGTAAGGACTACAAAGAAACTGGTTATTGTGGGTATGGTGATTCTTGCAAGTTTATGCATGATCGAGGCGATTATAAGTCTGGATGGCAGATGGAGAAAGAATGGGAGGAAGTTGAGAAGGCAAGGAAGAGAAGTTTGGCGATGGGTGGTGGTGACAATGATGAGGATGGGGCCGAGCAAGGTGATGACGACGACGACGATGATGATTCCCTGCCCTTTGCTTGCTTCATTTGTAGAGAGCCGTTTGTTGATCCAGTTGTGACCAAGTGCAAGCACTACTTCTGCGAGCATTGTGCTTTAAAGCATCACGCCAGGAACAAAAAGTGCTTTGTTTGCAATCAGCCTACCCTTGGAATCTTTAATACGGCTCATGAGATACGCAGAAAGATGGCAGAAGAGAAACGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149678.p1 GENE.R_Transcript_149678~~R_Transcript_149678.p1 ORF type:5prime_partial len:246 (-),score=60.38,zf-CCCH|PF00642.20|3.1e-10,zf-CCCH|PF00642.20|7.2e+03,zf-C3HC4_3|PF13920.2|4.5e-09,zf-RING_5|PF14634.2|9e-06 R_Transcript_149678:78-815(-)
ELFQFESSKLIQVQNDSKATATLETETDFSRDARAIRERALKQAEEALKGNKKASGDDKLYKGIHGYTDYKAGFRRELTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEKEWEEVEKARKRSLAMGGGDNDEDGAEQGDDDDDDDDSLPFACFICREPFVDPVVTKCKHYFCEHCALKHHARNKKCFVCNQPTLGIFNTAHEIRRKMAEEKR*

Click here to download the sequence:
Link to NCBI Protein BLAST