Transcript Information: R_Transcript_149690.p1


Annotated TAIR IDAT3G13235.1
Annotated Gene Nameubiquitin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4271492-4274348 | Reverse length=414
E-Value7.4E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 192.590685714614
Replicate 268.530297726803
Replicate 382.974526498412
Condition 2: 8 Hour
Replicate 171.975399627011
Replicate 285.436977107484
Replicate 3105.48151450104
Condition 3: 24 Hour
Replicate 184.77156421852
Replicate 269.797151016912
Replicate 375.149552653802


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149690.p1 GENE.R_Transcript_149690~~R_Transcript_149690.p1 ORF type:complete len:413 (+),score=131.73,Asp_protease|PF09668.6|8.4e-56,ubiquitin|PF00240.19|4.4e-14,Asp_protease_2|PF13650.2|4.6e-11,UBA|PF00627.27|8.5e-10,Rad60-SLD|PF11976.4|1.9e-07,RVP_2|PF08284.7|1e-06,gag-asp_proteas|PF13975.2|1.6e-06 R_Transcript_149690:159-1397(+)
ATGAAGATCACTGTAATGACTGCCGATGAACAGATCATCAGCTTAGATGTCGACCCCAATGAATCCGTCGAGAATGTCAAGGCTTTGCTCGAAGTCGAGAGTGGAGTGGCTTTGCAGCAGCAACAGCTCTTGTACAATGGAAAGGAGATGAGGAACCACGAGAAGCTGAGTGGACTTGGTGTTGCTGATGGGGATTTGATTATGATGCTCCCTAATAATGCTTCTGCTCCTGCTCCTAGTCCATCGGCTAATGACGTGCGCCTCAATCCAGATGGGTCTGCTGTCAACCCTGCAGCTTTTCAGCAGCAAATTGGTCGTGATGCTAATCTCATGGCTCAACTCTTTCAGACTGACCCTGAACTTGCGCAAGCAATTTCTGGGGATAATCTCAACAGACTTCAGGAAATTTTGCGGCAGCGGCATCAACAAAGGTCTGAATTGAGACGCAGGGAAGAGGAGGAACTTGCATTGCTTTATGCAGACCCTTTTGATGTGGAAGCCCAGAAGAAAATTGAAGCTGCAATTCGACAGAAAGGCATTGATGAGAACTGGGCTGCAGCCCTGGAGCACAATCCTGAAGCTTTTGCTAGAGTGGTTATGTTGTACGTGGACATGGAAGTGAATGGTGTTCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCAACAATAATTTCTAAAAGTTGTGCGGAGCGCTGTGGACTATTGAGGCTCCTGGATCAACGATATAGAGGCATTGCTCATGGAGTTGGTCAGACAGAAATCCTGGGTCGAATACATGTGGCTCCAATCAAGATTGGGAATGTGTTTTACCCTTGTTCCTTTACAGTCCTCGACTCTCCAAACATGGAGTTCCTCTTTGGTCTGGACATGCTTCGCAAGCATCAGTGCATAATTGATTTGAAGGACAATGTATTAAGAGTTGGTGGAGGAGAGGTTTCTGTACCATTTTTGGCTGAAAAGGACATCCCTTCTCAGTTTCGGGATGAAGAGAGGTATTCAAAGCAGGCTTCCAGTTCAGGAGCTCCTAATACGTCTCAAACAAAAGAGAATAAAGATGTCCCATTTGGAAGTCAATCTTCTGGTGCTGCTCGTGCTCTTCCTGGTCAGGGTCCTGAATTTGAAGCCAAAATTGCCAAGCTTGTTGAGCTAGGATTTGAAAGGAATGCTGTCATAGAAGCTCTCAGGCTTTTTGATGGCAATGAAGAGCAGGCAGCTGGGTTTCTCTTTGGAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149690.p1 GENE.R_Transcript_149690~~R_Transcript_149690.p1 ORF type:complete len:413 (+),score=131.73,Asp_protease|PF09668.6|8.4e-56,ubiquitin|PF00240.19|4.4e-14,Asp_protease_2|PF13650.2|4.6e-11,UBA|PF00627.27|8.5e-10,Rad60-SLD|PF11976.4|1.9e-07,RVP_2|PF08284.7|1e-06,gag-asp_proteas|PF13975.2|1.6e-06 R_Transcript_149690:159-1397(+)
MKITVMTADEQIISLDVDPNESVENVKALLEVESGVALQQQQLLYNGKEMRNHEKLSGLGVADGDLIMMLPNNASAPAPSPSANDVRLNPDGSAVNPAAFQQQIGRDANLMAQLFQTDPELAQAISGDNLNRLQEILRQRHQQRSELRRREEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGIAHGVGQTEILGRIHVAPIKIGNVFYPCSFTVLDSPNMEFLFGLDMLRKHQCIIDLKDNVLRVGGGEVSVPFLAEKDIPSQFRDEERYSKQASSSGAPNTSQTKENKDVPFGSQSSGAARALPGQGPEFEAKIAKLVELGFERNAVIEALRLFDGNEEQAAGFLFGG*

Click here to download the sequence:
Link to NCBI Protein BLAST