Transcript Information: R_Transcript_149743.p1


Annotated TAIR IDAT5G27660.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9789835-9792235 | Reverse length=428
E-Value6E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6453566601042
Replicate 22.7386478803867
Replicate 32.6558536343365
Condition 2: 8 Hour
Replicate 14.2584112951731
Replicate 22.5925660105722
Replicate 31.4468675132192
Condition 3: 24 Hour
Replicate 12.9944965949179
Replicate 22.077669315779
Replicate 32.6963114469366


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149743.p1 GENE.R_Transcript_149743~~R_Transcript_149743.p1 ORF type:complete len:138 (+),score=29.10,PDZ_2|PF13180.2|2.2e-06,PDZ|PF00595.20|9.8e-06 R_Transcript_149743:304-717(+)
ATGCCGATTAACATAGCATACAAATGGTGGGAGCATTACAAGAAATATGGGGAACACCGTCGACCTTATTTGGGTATAGAAGCAACAAACCTCTATGTGGCTGATCTTGATGTCATGGAGAAGATAATTCATAAGTTTCCTGGTGTTTGCAAAGGCGTTCTTGTTGAGAAGGTGATACAAGGCTCTTCTGCTGATATTGCTGGACTACATCAGGATGATGTTATAATTCAATGTGATGGACAAAGATTTCAGAGCTTCTTAGAGTTCTTTGAGATAATGTGGGACAAGGTCGGAAATCTTGTGGAATTGGTTGTGGCACGACCAGATCAAGGTGAACTTTTACATCTTAAGATGGTGGTTGCTGACGCTACTTCAGATAAATTCAACAGCTGGCCTCGCAGAGACTGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149743.p1 GENE.R_Transcript_149743~~R_Transcript_149743.p1 ORF type:complete len:138 (+),score=29.10,PDZ_2|PF13180.2|2.2e-06,PDZ|PF00595.20|9.8e-06 R_Transcript_149743:304-717(+)
MPINIAYKWWEHYKKYGEHRRPYLGIEATNLYVADLDVMEKIIHKFPGVCKGVLVEKVIQGSSADIAGLHQDDVIIQCDGQRFQSFLEFFEIMWDKVGNLVELVVARPDQGELLHLKMVVADATSDKFNSWPRRDCR*

Click here to download the sequence:
Link to NCBI Protein BLAST