Transcript Information: R_Transcript_149744.p1


Annotated TAIR IDAT5G27660.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9789835-9792235 | Reverse length=428
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85560754475244
Replicate 21.4434956536205
Replicate 30.57266843990381
Condition 2: 8 Hour
Replicate 11.3008115753224
Replicate 20.90841082479816
Replicate 31.8718848452274
Condition 3: 24 Hour
Replicate 10.50220203310603
Replicate 20.55138147226443
Replicate 30.61559169431899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149744.p1 GENE.R_Transcript_149744~~R_Transcript_149744.p1 ORF type:5prime_partial len:320 (+),score=61.52,Trypsin_2|PF13365.2|4.6e-09 R_Transcript_149744:1-960(+)
TTTCAGGGCAGAGTCCCAAATCCCAATCCCCAAAAATCTCGCCTGGTCTTCTCACTATATTTATTGGTTTTTGTTCTCGCAAGAAAGAATTGTAAGTCTAACCCCAAAAGTCTGGCTTACTTACAGAACTCACTCATGGCCAGAAGTGCAAAGAAGAGGGTGAGGGAGACGGAGGAGAACCCTTGGGAACGAGTACATGTACCCGAAGGAGATATCCGCCCTACAAGAGATCCCGATGAAATTCGTGCAATAGAATTGGCTATAAAGCGCCCAAGATTTCAATCATACCACCATAATGTCTACTTGGATATTCAGACCAAGATTGCAGCTCTCAAGGCTTCTCCTTCTGTTGTTTCTCTTGTCTCCTATTCTGGTGAGGTGCAGATAGTTCAGGGTTCTGGTACAATTATTGAAGCTGATGATCAGAACCGCGGTATTGTTCTTACATCAGCCAATCTCATCAGGCGTCCTTCTACTACTGAAGATGAGTTTATTATGGAGAACATTTTAGCCGACAACCTGAGGGTTGTTGTGTACTTATATGATGGTAAATCATATGAGGGTGAAATCTGCACTTATGATTTCCACTACAACCTTGCTGTCATAAGGTTTCAGTCAAATTCTTTACTCACGGCAGCAACATTGAGACACTTGGATGATTCTATCAGCATTGATCCAAGTCGTGATTTCCAACTCCGTCCACATTCAAGTTCATCCCTCCTTCATCCTGGTGATAGAGTGATTGCATTGGGGCGTTATTTTACTGATCCATTTGACCTTATGGCTGCTCCTGGACAATTTAGACTTGATCCTTGTGAATGGGACTGCAAAGAGCTTTTCATGGTGACTTGCTCAACCACAAGAGTTGGTGATGGGGGTCCACTCATCAATCTTTCTGGAGAGGTCATTGGTTTTACATTTTATGATTATGGTTTAAGGCTTGCATGCCGATTAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149744.p1 GENE.R_Transcript_149744~~R_Transcript_149744.p1 ORF type:5prime_partial len:320 (+),score=61.52,Trypsin_2|PF13365.2|4.6e-09 R_Transcript_149744:1-960(+)
FQGRVPNPNPQKSRLVFSLYLLVFVLARKNCKSNPKSLAYLQNSLMARSAKKRVRETEENPWERVHVPEGDIRPTRDPDEIRAIELAIKRPRFQSYHHNVYLDIQTKIAALKASPSVVSLVSYSGEVQIVQGSGTIIEADDQNRGIVLTSANLIRRPSTTEDEFIMENILADNLRVVVYLYDGKSYEGEICTYDFHYNLAVIRFQSNSLLTAATLRHLDDSISIDPSRDFQLRPHSSSSLLHPGDRVIALGRYFTDPFDLMAAPGQFRLDPCEWDCKELFMVTCSTTRVGDGGPLINLSGEVIGFTFYDYGLRLACRLT*

Click here to download the sequence:
Link to NCBI Protein BLAST