Transcript Information: R_Transcript_149787.p1


Annotated TAIR IDAT1G08550.1
Annotated Gene Namenon-photochemical quenching 1
Annotated Gene Symbol(s)NPQ1, AVDE1
Annotation TypeOrtholog
Chromosome Positionchr1:2707462-2709387 | Forward length=462
E-Value2.4E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5177012546567
Replicate 22.203037945179
Replicate 33.0902022881319
Condition 2: 8 Hour
Replicate 12.0972903595071
Replicate 21.6279871147758
Replicate 32.2932441683144
Condition 3: 24 Hour
Replicate 11.3764852299266
Replicate 21.0862333072447
Replicate 32.2496998393385


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149787.p1 GENE.R_Transcript_149787~~R_Transcript_149787.p1 ORF type:complete len:467 (+),score=97.46,VDE|PF07137.7|2.8e+03,VDE|PF07137.7|2.4e-126 R_Transcript_149787:508-1908(+)
ATGGCGTTAGTTGCACGATCGATATCCTTGTCCTACGATGATAATATTGGTCTGTGCAATATTTCACAGAAAAGATTTACTAAATGGTTCCAATGGAGGAACCCATTTCAATTCCAAGATGTAGTTAGAATGAGGTATAATGGGAGAAAGTTATCATATGGAAAGGTCCATGGAAGACCCCAGAGTTTATTTCATAGTCCAAAGTCCAGAAATTTGAGATGGATTTCATGTGGACTGGAGGTGAATACCTCAGAGATTGCCTCCAATCTTGTCGCATCTGAGAAGTGGAGACCATTTAAGTTGCAGTTTCTGAAAGTGACGGCTGCCGTGGCATGCACCTTTTTGGTCATGTCTTCTGCAGAAGCTGTTGACGCCCTTAAAACGTGTACTTGCTTATTGAAGGAGTGCAGAATAGAACTTGCCAAGTGCATTGCAAATCCTTCATGTGCTGCCAATGTAGCCTGTTTGCAGACCTGCAATGATAGGCCTGATGAAACTGAGTGTCAGATCAAGTGTGGAGACTTGTTTGAGAACAGGGTTGTGGATGAGTTCAATGAATGTGCGGTCTCTAGAAAGAAATGCGTGCCTCGAAAATCTGATGTTGGAGAGTTTCCTGTTCCTGATCCTGGTGTTCTTGTTCAGAGGTTCAACCTAGCGGATTTCAGTGGGAAATGGTTTATAAGTAGCGGCCTGAACCCTACATTTGACACCTTTGATTGCCAATTACATGAGTTCCGGGTTGAAGATGGCAAGCTTGTGGGAAATTTATCCTGGCGAATCAAAACACCAGATGGTGGATTTTTCACTCGATCTGCTGTGCAGAGATTTGTGCAGGATCCTAATCAACCCGGGATACTGTACAATCATGATAATGAGTATCTTCACTATCAAGATGATTGGTACATTCTATCATCTAAGATAGAAAATCAGCCGGATGATTACATATTCGTTTATTATCGGGGTAGAAATGATGCCTGGGATGGCTATGGTGGTGCTGTTATATACACAAGAAGTTCAGTTTTGCCGGACAATATTGTTCCTGAGCTTCAAAGAGCATCTCAGAGTGTAGGACGAGATTTCAACAAATTCATCCGCACAGACAATACTTGTGGGCCCGAGCCTCCACTTGTTGAGAGGCTGGAGAAGAAGGTGGAGGAAGGAGAGAGAACCATCATAAGGGAAGTTGAGGAGTTAGAAGGAGAAGTGGAGAAGGTTGGGAGGACTGAGATTTCACTATTTAAGAGGCTTGCAGACGGGTTTAAAGAGCTTCGGAAGGATGAAGAGAACTTCCTCAGAGGATTAAGTAAGGAGGAGATGGAACTTTTAAGCGAATTAAAGATGGAAGCCAGCGAGGTGGAAAAACTCTTTGGGCAAGCACTTCCCCTCAGAAAACTTCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149787.p1 GENE.R_Transcript_149787~~R_Transcript_149787.p1 ORF type:complete len:467 (+),score=97.46,VDE|PF07137.7|2.8e+03,VDE|PF07137.7|2.4e-126 R_Transcript_149787:508-1908(+)
MALVARSISLSYDDNIGLCNISQKRFTKWFQWRNPFQFQDVVRMRYNGRKLSYGKVHGRPQSLFHSPKSRNLRWISCGLEVNTSEIASNLVASEKWRPFKLQFLKVTAAVACTFLVMSSAEAVDALKTCTCLLKECRIELAKCIANPSCAANVACLQTCNDRPDETECQIKCGDLFENRVVDEFNECAVSRKKCVPRKSDVGEFPVPDPGVLVQRFNLADFSGKWFISSGLNPTFDTFDCQLHEFRVEDGKLVGNLSWRIKTPDGGFFTRSAVQRFVQDPNQPGILYNHDNEYLHYQDDWYILSSKIENQPDDYIFVYYRGRNDAWDGYGGAVIYTRSSVLPDNIVPELQRASQSVGRDFNKFIRTDNTCGPEPPLVERLEKKVEEGERTIIREVEELEGEVEKVGRTEISLFKRLADGFKELRKDEENFLRGLSKEEMELLSELKMEASEVEKLFGQALPLRKLR*

Click here to download the sequence:
Link to NCBI Protein BLAST