Transcript Information: R_Transcript_149796.p1


Annotated TAIR IDAT1G08550.1
Annotated Gene Namenon-photochemical quenching 1
Annotated Gene Symbol(s)NPQ1, AVDE1
Annotation TypeOrtholog
Chromosome Positionchr1:2707462-2709387 | Forward length=462
E-Value7.4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87966076890211
Replicate 20
Replicate 30.27598479031509
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.52741457076861


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149796.p1 GENE.R_Transcript_149796~~R_Transcript_149796.p1 ORF type:5prime_partial len:83 (-),score=11.52,VDE|PF07137.7|6.6e-46 R_Transcript_149796:102-350(-)
TTTATAAGTAGCGGCCTGAACCCTACATTTGACACCTTTGATTGCCAATTACATGAGTTCCATGTCGAAGATGGCAAGCTTGTGGGAAATTTATCCTGGCGAATCAAAACACCAGATGGTGGATTTTTCACTCGATCTGCTGTGCAGAGATTTGTGCAGGATCCTAATCAACCCGGGATACTGTACAATCATGATAATGAGTATCTTCACTATCAAGATGATTGGTACTATTCAAATTTTTGTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149796.p1 GENE.R_Transcript_149796~~R_Transcript_149796.p1 ORF type:5prime_partial len:83 (-),score=11.52,VDE|PF07137.7|6.6e-46 R_Transcript_149796:102-350(-)
FISSGLNPTFDTFDCQLHEFHVEDGKLVGNLSWRIKTPDGGFFTRSAVQRFVQDPNQPGILYNHDNEYLHYQDDWYYSNFCA*

Click here to download the sequence:
Link to NCBI Protein BLAST