Transcript Information: R_Transcript_149817.p1


Annotated TAIR IDAT5G04860.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1411760-1414459 | Reverse length=782
E-Value6E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1926526853941
Replicate 21.6290233081611
Replicate 32.9620781374335
Condition 2: 8 Hour
Replicate 12.533020511784
Replicate 25.0119217919899
Replicate 34.6943820569966
Condition 3: 24 Hour
Replicate 11.5832970501865
Replicate 23.4223677588827
Replicate 35.0945519529847


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149817.p1 GENE.R_Transcript_149817~~R_Transcript_149817.p1 ORF type:internal len:116 (-),score=31.31,NT-C2|PF10358.5|1.6e-13 R_Transcript_149817:1-345(-)
CTTGATCATAGTGATGATAAAGGTGGAGTCTTTGAAGATGGATTGAGTGGATTAAGGGTTGAGATTAAGTGGAAAGGTTCAAAGGCAAATGGGTTCAAGTCTTTTAGGAAAAAGAGTGTGAAAAATGATTGTACAAGAGTTGGGAAATTGGTTCAAAACGGTGTCGTTCAATGGGATGAAGAGTTCAAGACTGTCTGTGGGTTTTATTATCAGGATAACAATAAAGTTGAGGGTGTTTTTCTTCCTTGGGATGTTCAATTTCTGGTCTTCCATGGCTCTAGGAAGCAATCAAAGAAGAAGGTTGCGTTGGCATCGCCTGCAGTACTGAACCTCGCTGATTATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149817.p1 GENE.R_Transcript_149817~~R_Transcript_149817.p1 ORF type:internal len:116 (-),score=31.31,NT-C2|PF10358.5|1.6e-13 R_Transcript_149817:1-345(-)
LDHSDDKGGVFEDGLSGLRVEIKWKGSKANGFKSFRKKSVKNDCTRVGKLVQNGVVQWDEEFKTVCGFYYQDNNKVEGVFLPWDVQFLVFHGSRKQSKKKVALASPAVLNLADYA

Click here to download the sequence:
Link to NCBI Protein BLAST