Transcript Information: R_Transcript_149837.p1


Annotated TAIR IDAT5G52010.1
Annotated Gene NameC2H2-like zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21121626-21122816 | Reverse length=396
E-Value1.3E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1820626531098
Replicate 21.9543095852879
Replicate 33.0068509971083
Condition 2: 8 Hour
Replicate 13.2725738354313
Replicate 23.3621373651425
Replicate 34.0288777749308
Condition 3: 24 Hour
Replicate 12.9587627453366
Replicate 22.1055139752341
Replicate 34.6491783225152


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149837.p1 GENE.R_Transcript_149837~~R_Transcript_149837.p1 ORF type:5prime_partial len:419 (+),score=101.24,NYN|PF01936.14|0.7,NYN|PF01936.14|0.00031 R_Transcript_149837:3-1259(+)
ACAATGGTTCCACCACTACCAACTTCCCTACTACCACCACGATCTCTCTCCTCCTCTCTCTCCTTTTGCTATTCTGTTTCCCCCATCTATCTCCACTCACCACACCCACCCAATAAATATAATCCAATCTTCCCCAAACACAACAAAAAACAAGCACTAATCTCACTCTTTATCACCCAAAAACCCATTAAGATTCTCTCCCCGAAATGCCACTCCGACATAGATATGGTGCAAACCTCAGAAGGGTCCTTCGCCCCAAAACAAAGCAAAGTTGTAGTCTTGTGGGATTTAGATAACAAGCCCCCAAGAGGCCGCCCTTATCAGGCTGCTATTGCTCTCAAAACTCTTGCTGAAAAGTTTGGTCAAGTGGTTGATATTTCAGCTTATGCTAACCGCCATGCTTTCTCTCATTTGCCCAATTGGGTCCTTGAGCAACGCCGTGAACGACGTCGTTTGGATGTTCTTGAGAGGAAAGGTATGGTCAGCCCTTCATCCTCTTATATATGTAATGTTTGTGGTAGGAAATGTAAGACACATTTGGATTTAAAGAAACATTTTTTGCAATTACATGAGAGGGAAAGGCAAAAGAAGCTCAATAGGATGAAGCTACTAAAGGGTAAGAAAAGACAGAGGTTTAAAGAGAGGTATTTGGATAAGAATTATAAGTATGAAGAGGGTGCTAAGAATTTGATTACTCCTAAAGTAGGGTATGGTTTAGCTAAGGAGTTGAGGCGTGCCGGGGTGTTTGTGAAGACAGTTGAGGATAAACCTCAGGCTGCTGATTGGGCCTTGAAGAGACAGATGTTACATTCTATGAGTAGGGGAATTGATTGGTTGATTTTGGTTTCAGATGATTCGGATTTTAAGGACATGTTGAGGAGGGCAAGGGAAGCAAATTTGGGGACGGTGGTTGTTGGGGATCGGGATAGGGCTTTGGGAAGCCATGCTGATTTGTGGGTGCCTTGGATTGAGGTGGAGAACGGGGAGGTGACTGACAAGGATTTGGTGGTGCCCAAGAAACCAGCGTTTGATGGGCATGATGGGTTGTTTTCAGTTTCAGGTTTTTATGGGAGTGTTGAAGTTGGGTTTGATTTGGATAGAATTGTTGATGATCTTGTTGTTGCTGGTGGGTGTAATTCTAGGAATTCAGCCTTTTCTGATGGAGAAGAAGAAAAAGAGGGGCAGAATGATTTTGAGTACGACGATGATGATGATGAGTATGATGATTTATTGAACTCAGAGGAGGAATTCGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149837.p1 GENE.R_Transcript_149837~~R_Transcript_149837.p1 ORF type:5prime_partial len:419 (+),score=101.24,NYN|PF01936.14|0.7,NYN|PF01936.14|0.00031 R_Transcript_149837:3-1259(+)
TMVPPLPTSLLPPRSLSSSLSFCYSVSPIYLHSPHPPNKYNPIFPKHNKKQALISLFITQKPIKILSPKCHSDIDMVQTSEGSFAPKQSKVVVLWDLDNKPPRGRPYQAAIALKTLAEKFGQVVDISAYANRHAFSHLPNWVLEQRRERRRLDVLERKGMVSPSSSYICNVCGRKCKTHLDLKKHFLQLHERERQKKLNRMKLLKGKKRQRFKERYLDKNYKYEEGAKNLITPKVGYGLAKELRRAGVFVKTVEDKPQAADWALKRQMLHSMSRGIDWLILVSDDSDFKDMLRRAREANLGTVVVGDRDRALGSHADLWVPWIEVENGEVTDKDLVVPKKPAFDGHDGLFSVSGFYGSVEVGFDLDRIVDDLVVAGGCNSRNSAFSDGEEEKEGQNDFEYDDDDDEYDDLLNSEEEFG*

Click here to download the sequence:
Link to NCBI Protein BLAST