Transcript Information: R_Transcript_149899.p1


Annotated TAIR IDAT3G11640.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52480.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3674501-3675061 | Forward length=186
E-Value6.6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3376842888629
Replicate 23.9593023642162
Replicate 33.795973658791
Condition 2: 8 Hour
Replicate 15.7366883590689
Replicate 25.2388351742206
Replicate 34.8750039951896
Condition 3: 24 Hour
Replicate 12.2301869878341
Replicate 22.7726611176726
Replicate 35.1279765266445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149899.p1 GENE.R_Transcript_149899~~R_Transcript_149899.p1 ORF type:5prime_partial len:175 (+),score=20.90 R_Transcript_149899:3-527(+)
CAAATCTCCCAATCTCTCAATCTTCTTCAAAACCCCATCATCCAAAAAAAATTCTCCCTTCTAAAACCTCCAAAAAAAAAAAAAAAACCCACCAAAAATTTTAAAAAAAGAAAAAAAAAAATGACCAAGTTGAGCAAACTAGGAATTATTCTAACTTCACTCTTCTCATTCCTCCTCTTAGCTCTCCTAGCTGAAATCCTCTATCTTGTATGGCGCCGCCGCAACCTAAAACGGACCCGGGTCGAGCCCGCCGGGTCTGGCCCCCGTGACCCGGGTGTTATGAGAAACTTGTCGGACTCAGAAGGGCTTAAACTTGATGGGCTTTATGGCCCATCAAGGGTTTTGTTCACCATCAAAGAAGAAGAAGCAGAAAAAGAAGAGGGTGAAAATGGAGAAGTTGTTAATATTATGGTGGTTGGTTTTTCATCAGAGTATGAAGTTGAAGAACCACCGTTCTTAACGCCTTGTGGGTCCCCACCTTATTACACTCCTTCGTCTTCTCCGTCAAGGGATTGTAGAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149899.p1 GENE.R_Transcript_149899~~R_Transcript_149899.p1 ORF type:5prime_partial len:175 (+),score=20.90 R_Transcript_149899:3-527(+)
QISQSLNLLQNPIIQKKFSLLKPPKKKKKPTKNFKKRKKKMTKLSKLGIILTSLFSFLLLALLAEILYLVWRRRNLKRTRVEPAGSGPRDPGVMRNLSDSEGLKLDGLYGPSRVLFTIKEEEAEKEEGENGEVVNIMVVGFSSEYEVEEPPFLTPCGSPPYYTPSSSPSRDCRK*

Click here to download the sequence:
Link to NCBI Protein BLAST