Transcript Information: R_Transcript_149996.p1


Annotated TAIR IDAT1G53430.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19935298-19940959 | Forward length=1030
E-Value6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8252960954719
Replicate 20.96906001921376
Replicate 33.171702128698
Condition 2: 8 Hour
Replicate 11.6951752655785
Replicate 21.5480610505436
Replicate 32.6529277060566
Condition 3: 24 Hour
Replicate 12.3840799813385
Replicate 21.7813862950082
Replicate 31.6836695912998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_149996.p1 GENE.R_Transcript_149996~~R_Transcript_149996.p1 ORF type:3prime_partial len:260 (+),score=31.21,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|3.2e-06,LRR_8|PF13855.2|0.016,LRR_8|PF13855.2|1.4e-07,LRR_8|PF13855.2|1.8e-06,LRR_4|PF12799.3|1.4e+03,LRR_4|PF12799.3|0.87,LRR_4|PF12799.3|0.0085,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.00012,LRR_1|PF00560.29|6.2e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|3.2e+02,LRR_1|PF00560.29|4.7,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|6.8,LRR_1|PF00560.29|17,LRR_1|PF00560.29|2.3e+02 R_Transcript_149996:238-1014(+)
ATGGCGTCGATTTTAGTAGGACGTTTCCCTCTCCTCCTCCTCCTCCTCTTGGCGTTTCTTTTCAGCAACTGTTTCTTCGACTTCCGATCTACCGCTCAACTCATCCCTGAAGATGAAGTGAAAACTCTGAAAATAATCTCCAACAAATTGAAGATTTCATACTGGAAGAATATCGACCAGACATCTTGCAATGATACAGATCAAAGCTTTAACCAATTTATTGGTATCAGTACCCTCAGCAATGTCACCTGTAATTGTTCATTTAACCAAGGCACTGTTTGCCATGTCACAAATATTCAGCTGAAGAGTCTTAATCTTACCGGAGCTATTCCTGAAGAATTTGGAAACCTTAGTCACTTGCAGGAAATTGATCTTGCCAGGAATGTACTTAAAGGAACAATCCCCAAAAGTCTTTCGAAGCTCCCGCTTACCATTTTGTCAATCTATGGGAATCGGGTAACTGGCCCAATTCCAGACAACATAGGAGAAATCTCGATGCTTGAGCATTTGATCTTGGAAGATAACGAACTTGATGGACCTTTACCACAAAGCTTGGGAAATTTGAAAAGTTTAAAAACAATGGCGTTTGCAGGAAACAACTTTACTGGAACAATACCTGAAACATTTTCCAAGCTAAAGAATCTTACACAATTAAGGGTCAATGGAAATGGCATATCTGGGAAGATACCTGATTTTATTGGCAACTTGACCAACCTTACCACACTGGATATACAAGGCACAGCTATGGAGGGACCAATTCCATCTAGCTTATCTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_149996.p1 GENE.R_Transcript_149996~~R_Transcript_149996.p1 ORF type:3prime_partial len:260 (+),score=31.21,LRR_8|PF13855.2|2.2e+03,LRR_8|PF13855.2|3.2e-06,LRR_8|PF13855.2|0.016,LRR_8|PF13855.2|1.4e-07,LRR_8|PF13855.2|1.8e-06,LRR_4|PF12799.3|1.4e+03,LRR_4|PF12799.3|0.87,LRR_4|PF12799.3|0.0085,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.00012,LRR_1|PF00560.29|6.2e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|3.2e+02,LRR_1|PF00560.29|4.7,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|6.8,LRR_1|PF00560.29|17,LRR_1|PF00560.29|2.3e+02 R_Transcript_149996:238-1014(+)
MASILVGRFPLLLLLLLAFLFSNCFFDFRSTAQLIPEDEVKTLKIISNKLKISYWKNIDQTSCNDTDQSFNQFIGISTLSNVTCNCSFNQGTVCHVTNIQLKSLNLTGAIPEEFGNLSHLQEIDLARNVLKGTIPKSLSKLPLTILSIYGNRVTGPIPDNIGEISMLEHLILEDNELDGPLPQSLGNLKSLKTMAFAGNNFTGTIPETFSKLKNLTQLRVNGNGISGKIPDFIGNLTNLTTLDIQGTAMEGPIPSSLSL

Click here to download the sequence:
Link to NCBI Protein BLAST