Transcript Information: R_Transcript_15003.p2


Annotated TAIR IDAT5G50450.1
Annotated Gene NameHCP-like superfamily protein with MYND-type zinc finger
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20543519-20544698 | Reverse length=336
E-Value4.6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30677245302048
Replicate 20.70575799718649
Replicate 30
Condition 2: 8 Hour
Replicate 10.61729071295576
Replicate 20.75162628037599
Replicate 31.0677418011992
Condition 3: 24 Hour
Replicate 10
Replicate 20.18533831000485
Replicate 30.73572116594613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15003.p2 GENE.R_Transcript_15003~~R_Transcript_15003.p2 ORF type:complete len:119 (+),score=9.52 R_Transcript_15003:178-534(+)
ATGGTTTGCAGGAAAAGGCAGAGAGTTTGTTGTTCAGAACAAGAGAAATCAGACCCCTTTGAGAAATTACATGATGATCTTGTCATCACCATTTTCTCTAAACTCTCCTCTTCTTCTTCTTCCCCTTTTGACTTTATCAGTGTTCTCTTAGTTTGCAAGAGATTTAACCGTTTAGGACTGAATCAAATAGTTCTATCAAAAGCAAATTCAAGATTGTTAGCTATTAAAGCTAAGAACTGGTGTGAATCTGCTCACCGCTTTCTTAAACTCTGCGTTAATGCCGGTTCTGTTGAAGCCTGCTATTTTCTGGGCATGGTAAGCCCCCCCCCCCTAGGAGTATTTTTAAAATTAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15003.p2 GENE.R_Transcript_15003~~R_Transcript_15003.p2 ORF type:complete len:119 (+),score=9.52 R_Transcript_15003:178-534(+)
MVCRKRQRVCCSEQEKSDPFEKLHDDLVITIFSKLSSSSSSPFDFISVLLVCKRFNRLGLNQIVLSKANSRLLAIKAKNWCESAHRFLKLCVNAGSVEACYFLGMVSPPPLGVFLKLG*

Click here to download the sequence:
Link to NCBI Protein BLAST