Transcript Information: R_Transcript_15008.p1


Annotated TAIR IDAT5G50450.1
Annotated Gene NameHCP-like superfamily protein with MYND-type zinc finger
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20543519-20544698 | Reverse length=336
E-Value2.7E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7664155762631
Replicate 20.59263751175035
Replicate 30.92365877403841
Condition 2: 8 Hour
Replicate 13.1594664448058
Replicate 23.4262641530849
Replicate 35.855358264641
Condition 3: 24 Hour
Replicate 11.2034334433877
Replicate 20.44466247763261
Replicate 31.7651374747498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15008.p1 GENE.R_Transcript_15008~~R_Transcript_15008.p1 ORF type:internal len:248 (+),score=25.80,Sel1|PF08238.8|7.6,Sel1|PF08238.8|0.32,Sel1|PF08238.8|0.051 R_Transcript_15008:3-743(+)
AGTCAAAAAAAAAAGCCACAGAAAACCAAAAAGGGTTCTCATTCATTTCCATCAAGACATGACCAAAAATTGAAGATTTTTCTCAACAACATCAACACAAGAAAAAAACAAAGAAAAGGGGTGATGGTTTGCAGGAAAAGGCAGAGAGTTTGTTGTTCAGAACAAGAGAAATCAGACCCCTTTGAGAAATTACATGATGATCTTGTCATCACCATTTTCTCTAAACTCTCCTCTTCTTCTTCTTCGTTCCCTTTTGACTTTATCAGTGTTCTCTTAGTTTGCAAGAGATTTAACCGTTTAGGACTGAATCAAATAGTTCTATCAAAAGCAAATTCAAGATTGTTAGCTATTAAAGCTAAGAACTGGTGTGAATCTGCTCACCGCTTTCTTAAACTCTGCGTTAATGCCGGTTCTGTTGAAGCCTGCTATTTTCTGGGCATGATTCGATTTTACTGCTTGGAGAAAAGGAGCAGTGGCGCGTCATTGATGGCAAAGGCGGCGATTAAATCACACGCGCCGTCACTTTATTCACTGGCTGTGATCCAGTTCAACGGGAGCGGGGGAGCCAAGGGTGACAAAGACCTACGCGCTGGTGTTGCGTTGTGTGCACGCGCCGCTTGTCTTGGCCACGTGGACGCTTTGAGAGAGCTTGGTCACTGCCTTCAAGATGGGTATGGTGTGAAGCAAAATATTGCCGAGGGTCGCAAATTATTGGTCCAGGCTAATGCCCGTGAGCTAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15008.p1 GENE.R_Transcript_15008~~R_Transcript_15008.p1 ORF type:internal len:248 (+),score=25.80,Sel1|PF08238.8|7.6,Sel1|PF08238.8|0.32,Sel1|PF08238.8|0.051 R_Transcript_15008:3-743(+)
SQKKKPQKTKKGSHSFPSRHDQKLKIFLNNINTRKKQRKGVMVCRKRQRVCCSEQEKSDPFEKLHDDLVITIFSKLSSSSSSFPFDFISVLLVCKRFNRLGLNQIVLSKANSRLLAIKAKNWCESAHRFLKLCVNAGSVEACYFLGMIRFYCLEKRSSGASLMAKAAIKSHAPSLYSLAVIQFNGSGGAKGDKDLRAGVALCARAACLGHVDALRELGHCLQDGYGVKQNIAEGRKLLVQANARELA

Click here to download the sequence:
Link to NCBI Protein BLAST