Transcript Information: R_Transcript_150184.p1


Annotated TAIR IDAT3G55530.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)SDIR1
Annotation TypeOrtholog
Chromosome Positionchr3:20595300-20597188 | Reverse length=273
E-Value1.8E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5085091698115
Replicate 20.86761571968174
Replicate 31.3251831667196
Condition 2: 8 Hour
Replicate 12.0236252022517
Replicate 21.4784054109875
Replicate 31.3501197982106
Condition 3: 24 Hour
Replicate 11.7076054962755
Replicate 21.0936492011857
Replicate 31.4471209710345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_150184.p1 GENE.R_Transcript_150184~~R_Transcript_150184.p1 ORF type:complete len:121 (+),score=23.62,zf-RING_2|PF13639.2|3.4e+02,zf-RING_2|PF13639.2|3.1e-13,zf-RING_11|PF17123.1|2e-09,zf-RING_11|PF17123.1|2.5e+03,zf-C3HC4|PF00097.21|3.8e+02,zf-C3HC4|PF00097.21|9.8e-08,zf-rbx1|PF12678.3|5.3e-07,zf-C3HC4_2|PF13923.2|2.2e+03,zf-C3HC4_2|PF13923.2|1.3e-06,zf-C3HC4_3|PF13920.2|1.3e+03,zf-C3HC4_3|PF13920.2|4e-06,zf-RING_5|PF14634.2|2.3e+03,zf-RING_5|PF14634.2|6.9e-06 R_Transcript_150184:583-945(+)
ATGTGTTTTTTTTTGGCTCAGTCCTACCTTTTCACTTTTTGTGCATACTGTATTTTGTGGGGTGGTTGTCTGGGGAACATGTTTTTCCTGTTGCTGATTCTTGTATTGACTCCATTGAGGGCAAAGCAAGATGCTAGGAGTGCAAAGGGCTTTGAGGACGATCTGACATGTACCATTTGTTTGGATCAAGTGAAGAGGGGAGACCTCCTCTGCACCTTGCCATGTTTACATCAGTTCCATGCCAATTGCATTGATCCATGGCTGCGGCAGCAGGGGACATGCCCTGTGTGCAAACTGAGAGTAGGTTCAGAAATGCAAGATGGATTGGACAATGCAGCAGCAGAAATAGATGATATGGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_150184.p1 GENE.R_Transcript_150184~~R_Transcript_150184.p1 ORF type:complete len:121 (+),score=23.62,zf-RING_2|PF13639.2|3.4e+02,zf-RING_2|PF13639.2|3.1e-13,zf-RING_11|PF17123.1|2e-09,zf-RING_11|PF17123.1|2.5e+03,zf-C3HC4|PF00097.21|3.8e+02,zf-C3HC4|PF00097.21|9.8e-08,zf-rbx1|PF12678.3|5.3e-07,zf-C3HC4_2|PF13923.2|2.2e+03,zf-C3HC4_2|PF13923.2|1.3e-06,zf-C3HC4_3|PF13920.2|1.3e+03,zf-C3HC4_3|PF13920.2|4e-06,zf-RING_5|PF14634.2|2.3e+03,zf-RING_5|PF14634.2|6.9e-06 R_Transcript_150184:583-945(+)
MCFFLAQSYLFTFCAYCILWGGCLGNMFFLLLILVLTPLRAKQDARSAKGFEDDLTCTICLDQVKRGDLLCTLPCLHQFHANCIDPWLRQQGTCPVCKLRVGSEMQDGLDNAAAEIDDMV*

Click here to download the sequence:
Link to NCBI Protein BLAST