Transcript Information: R_Transcript_150249.p1


Annotated TAIR IDAT5G19520.1
Annotated Gene Namemechanosensitive channel of small conductance-like 9
Annotated Gene Symbol(s)MSL9, ATMSL9
Annotation TypeHomolog
Chromosome Positionchr5:6586079-6588771 | Forward length=742
E-Value2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4555223792139
Replicate 23.3978745711872
Replicate 33.4972118467408
Condition 2: 8 Hour
Replicate 13.2523209929929
Replicate 23.8235401010882
Replicate 35.1267907859108
Condition 3: 24 Hour
Replicate 13.7854094360184
Replicate 22.5927556253045
Replicate 34.1436265361455


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_150249.p1 GENE.R_Transcript_150249~~R_Transcript_150249.p1 ORF type:5prime_partial len:655 (+),score=72.86,MS_channel|PF00924.14|1.1e-19 R_Transcript_150249:3-1967(+)
CAGCCCCAAGACAGAGCTTTCTGGTTTCACCAACTCTCCATAGATATCTCAAAAAGTATGACAACCAACGAAGATAACAATGTCGGAGAAACAGCATGCTCCATTCAAATCACAGGACCATGCCCAAGTTGTCATGAGCAAGACAAGCCTAGGAAAAAGCACGAAGAAATCGACGAGAAGAAGCCAGCAAAAAGTGTGTTATTTTGGTGTGGACTCGCAATCTTCTTCATAGGCATTGCAATTAGTGTGGTAAGCCTCACAATCCCATCTCTCAAGGGCGCCTCTCTAGGGGGTCTAGCAATGTGGCAATGGTCTTTGCTTCTAACGGCTGTGTTAGGTGGTCCGGTGGTAAGTCATGCAATAAGTGAACTCATTTTGCTCTTTGCACGCACCAACAAATCCCTTCATGCAATGTACTATGTGTTAAGGTTCATTGCAAGAGCGTGGGCGGTTTTATGGTTTAGTATCATTCTTCTTGCTTGGATTTGGGTTGTGGATGAACCGAAATACTTAGGCGTTGTTTCGATACAAAAAGAGGAGCATATATTCAAGCTATTCACCAAAGAAAAGAAGATTGTAACCTTAACTCTAATTACAATCATAGTAGGCACCGTTCTTTGGCTCATTAAAGATTTGCTTCTTCTAATTGGGATTAACAATTTTCACATAAAGAGATTTCCTCGAAGGATTAGAGAATCGTTGATGGATGAATATCGGATTAGAATCCTCTCCGGGTACAGAGACAGTGTGTTGTTCTTCCAGGGGCGAAGAAATGTTTGTGGAATGAAGACAAGATTTCCATTGTCAAGCTCAGAAATTGAAAATGAGGAGTTTAGTTTGTCAAGCTTTGAGATGCAAATTGTGTCTGATACAATTATAGAGGGGAGAAAACTTGCGTACTTGATGAATGGTGAGGAGAAGGAGATTGATTGTGAAAATGAAGTCAAAATTGCTGCATCTATCATCTTCTCTAAATTGGCTCAATATGTTGGACCTCATGATCAATGTGGAGTGAGTTCAGACGCTACAGTTGACCAGGTAGTACTACTACAAGCCCTCAAAGATCTGATCTGGAATAAAGAAAAGAATGACGCTGATAAAGTCCAGATCAAGCCCAACGCCAGCACTGAAGCTGAGGTCAAGGCTAAGATCCAAGTCGAGGCTGAAAAACTGTTGCGATGGTTGCTTGAAGGAACAGATGGTAAAGAATTCAACAAAAAGGTTTTGAAAAAATGCTTGTTTCGGGCTCTGAAGAAACGGCAAACACTAATCCATGCACTGCAAAGCAACAAGCAACTATTCGTACAACTGGACAGATGTGTAAAAGTGGTGCTTGTTGTGGTGATCTTCATAGTGTGGCTTGTACTTCTCCAAGAATGGTTCAGGAAAGCCTTGCTTGTCATCGGTGGTTTTATAGCAGGTTCTGCATTCCTTACCCAAGACTTTTGCAGAAGACTACTCGATGGTTTCTCATTCGTTTTTGTGGCCCATCCTTTTGATGTTGGTGACTGTTGTCTCATTCAAAATACTTTGGTCATCATAGAGGATATGGACCTCCTTACAACTGTGGCTGTTACGTTGGAATATGAGAAGAGAGTCTACCCAAATTCGATGTTGTTTGAGTCATATGTCAGCAACTATTCCAGAAGCCAAAGTTGTATGGGAGATTCTGTTGTGTTCTATCTCGACATGAGTACCCCTGAAAGCAAAATAAAGACGCTTGCAAACCGAATAAAAAGCCACATTAAGGCGAATCCACAAGATTGGCAACGAAAGCACGAGCTAGCTATAGAGTTCGAGTTGAAAGAGACGGAGAGCATGATAAAGGCAACACTACATGTCAACCACACCATAAACTACCACGACTACAATGAAAGAGTAGCAAGAAGAACTAAACTCATTTTACATATCAAGAAGATTCTTGAGGAACTTAATGTGATGCAAGCACGTGAGAACGCAAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_150249.p1 GENE.R_Transcript_150249~~R_Transcript_150249.p1 ORF type:5prime_partial len:655 (+),score=72.86,MS_channel|PF00924.14|1.1e-19 R_Transcript_150249:3-1967(+)
QPQDRAFWFHQLSIDISKSMTTNEDNNVGETACSIQITGPCPSCHEQDKPRKKHEEIDEKKPAKSVLFWCGLAIFFIGIAISVVSLTIPSLKGASLGGLAMWQWSLLLTAVLGGPVVSHAISELILLFARTNKSLHAMYYVLRFIARAWAVLWFSIILLAWIWVVDEPKYLGVVSIQKEEHIFKLFTKEKKIVTLTLITIIVGTVLWLIKDLLLLIGINNFHIKRFPRRIRESLMDEYRIRILSGYRDSVLFFQGRRNVCGMKTRFPLSSSEIENEEFSLSSFEMQIVSDTIIEGRKLAYLMNGEEKEIDCENEVKIAASIIFSKLAQYVGPHDQCGVSSDATVDQVVLLQALKDLIWNKEKNDADKVQIKPNASTEAEVKAKIQVEAEKLLRWLLEGTDGKEFNKKVLKKCLFRALKKRQTLIHALQSNKQLFVQLDRCVKVVLVVVIFIVWLVLLQEWFRKALLVIGGFIAGSAFLTQDFCRRLLDGFSFVFVAHPFDVGDCCLIQNTLVIIEDMDLLTTVAVTLEYEKRVYPNSMLFESYVSNYSRSQSCMGDSVVFYLDMSTPESKIKTLANRIKSHIKANPQDWQRKHELAIEFELKETESMIKATLHVNHTINYHDYNERVARRTKLILHIKKILEELNVMQARENAN*

Click here to download the sequence:
Link to NCBI Protein BLAST