Transcript Information: R_Transcript_150633.p1


Annotated TAIR IDAT5G40390.1
Annotated Gene NameRaffinose synthase family protein
Annotated Gene Symbol(s)SIP1
Annotation TypeOrtholog
Chromosome Positionchr5:16161720-16165085 | Forward length=783
E-Value1.4e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6336557136753
Replicate 21.5539430600702
Replicate 31.1039391612604
Condition 2: 8 Hour
Replicate 10.84288691728899
Replicate 21.5394755140231
Replicate 31.8745208902293
Condition 3: 24 Hour
Replicate 12.2128006966462
Replicate 21.8221212164332
Replicate 32.5617279151618


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_150633.p1 GENE.R_Transcript_150633~~R_Transcript_150633.p1 ORF type:5prime_partial len:581 (+),score=66.05,Raffinose_syn|PF05691.8|9.2e-261 R_Transcript_150633:2-1744(+)
CACCTGGGGACGTTCGAGGTCCTACAGGAGAAGACCCCACCGGGTATATTGGACAAGTTTGGTTGGTGCACATGGGATGCATTTTACCTCAAGGTAGACCCGAATGGAGTCAAAGAAGGCGTTAAGAAGCTAACACAAGGCGGGTGCCCATTCGGGTTCGTTCTGATAGACGACGGGTGGCAGTCCATATGCCATGACTCTGACCCGATAACCCGGGAGGGCATGGACCTGACATCACCCGGTGAACAGATGCCATGTAGGCTAGTAAAATACCAGGAGAATCACAAGTTCCGGGACTACCAAAGTGTAGAAGAAAATTGCAAAGGGTTAGGGGGGTTTGTGAGGGACTTAAAGGAGGAATTTAGGACAATAGAACATGTGTATGTATGGCATGCATTGATGGGGTATTGGGGAGGGATAAGACCAAATGTGCCAAATATGGCAAAGTCAAGGGTAATTAGTCCCAAGTTGTCTGTGGGATTGCAGATGACTATGGAAGATTTGGCCGTTGATAAGATCGTCGAAAACGGCATCGGATTGGTGCCGCCGGAGATGGTGGGAGAGATGTATGAGGGCCTCCATTCGCACCTTCGTCAAGCTGGGATTGATGGGGTTAAAGTTGATGTTATTCATCTGTTGGAAATGCTATCGGAGGATTACGGAGGGCGGGTGGACCTAGCTAAAGCATATTATAAGGCGCTTACAGCCTCAGTGAGGAAGCATTTCAATGGAAATGGAGTAATTGCTAGCATGGAGCACTGCAATGACTTCATGCTTCTTGGTACTGAGGCTATTTGTCTTGGACGCGTTGGTGACGATTTTTGGTGCACTGATCCAAATGGAGATCCAAATGGGACATATTGGCTACAAGGTTGTCACATGGTTCATTGTGCTTACAATAGCCTATGGATGAGAAACTTCATCCACCCTGATTGGGATATGTTCCAATCCACCCACCCTTGTGCGGAGTTTCATGCTGCGTCTCGAGCCATATCCGGTGGGCCGATCTATGTGAGTGATTGTGTTGGAAAACACAACTTTGAACTTCTTAAGAAGTTGGTTTTGCCTGATGGGTCTATTATAAGGTGCCAGCATTATGCACTTCCTACTAAAGATTGCCTCTTTGAGGACCCTTTGCATGATGGCAAAACTATGCTCAAGATTTGGAACCTTAACAAGTACACAGGAGTGATTGGAGCATTCAACTGCCAAGGCGGAGGATGGTTCCCTCAAATGAGACGCAACAAAGCTGCGTCCGAGTTCTCACACCCAGTAACCTCCTTGACAAACCCCAGAGATGTGGAATGGAACAAGGGCAAGAGCCCTATTTCAATCAAAGGGGTCAAAATTTTTGCAGTTTACACATTTAAAGAAAAGAAGCTAAGGCTCTTGAAACATGATGAAAACATGGAGTTAACATTGGATTGTTTCGACTATGAGCTCATGATTGTATCGCCGGTGAAATTGTTGCCTGGAAAACTAATCCAGTTTGCACCCATTGGACTAGTAAACATGCTTAACTCCGGTGGAGCAATCGATTCCCTCGTAATGGAAGAGGAAGAAGGGATTGTTAGGGTCGGAGTAAGGGGGTGTGGTGAATTCAAGGTATTTGCATCTGAGAAGCCAAAATCTTGTAATTTTAATGGCAAGGATGTGGGATTCTCCTACAGTGATTACATGGTTAGCATTGAAGTATCATGGCCTGGTTCTTCCGGAGTATCCATGATTGAGTTTGTTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_150633.p1 GENE.R_Transcript_150633~~R_Transcript_150633.p1 ORF type:5prime_partial len:581 (+),score=66.05,Raffinose_syn|PF05691.8|9.2e-261 R_Transcript_150633:2-1744(+)
HLGTFEVLQEKTPPGILDKFGWCTWDAFYLKVDPNGVKEGVKKLTQGGCPFGFVLIDDGWQSICHDSDPITREGMDLTSPGEQMPCRLVKYQENHKFRDYQSVEENCKGLGGFVRDLKEEFRTIEHVYVWHALMGYWGGIRPNVPNMAKSRVISPKLSVGLQMTMEDLAVDKIVENGIGLVPPEMVGEMYEGLHSHLRQAGIDGVKVDVIHLLEMLSEDYGGRVDLAKAYYKALTASVRKHFNGNGVIASMEHCNDFMLLGTEAICLGRVGDDFWCTDPNGDPNGTYWLQGCHMVHCAYNSLWMRNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFELLKKLVLPDGSIIRCQHYALPTKDCLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWFPQMRRNKAASEFSHPVTSLTNPRDVEWNKGKSPISIKGVKIFAVYTFKEKKLRLLKHDENMELTLDCFDYELMIVSPVKLLPGKLIQFAPIGLVNMLNSGGAIDSLVMEEEEGIVRVGVRGCGEFKVFASEKPKSCNFNGKDVGFSYSDYMVSIEVSWPGSSGVSMIEFVF*

Click here to download the sequence:
Link to NCBI Protein BLAST