Transcript Information: R_Transcript_150634.p1


Annotated TAIR IDAT5G40390.1
Annotated Gene NameRaffinose synthase family protein
Annotated Gene Symbol(s)SIP1
Annotation TypeOrtholog
Chromosome Positionchr5:16161720-16165085 | Forward length=783
E-Value1.3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31201642657639
Replicate 20.26918333867049
Replicate 30.1957840820184
Condition 2: 8 Hour
Replicate 10.3139213454775
Replicate 20
Replicate 30.62056788445767
Condition 3: 24 Hour
Replicate 10.58866172378728
Replicate 20.56551945873275
Replicate 30.28061159854997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_150634.p1 GENE.R_Transcript_150634~~R_Transcript_150634.p1 ORF type:5prime_partial len:234 (+),score=14.53,Raffinose_syn|PF05691.8|8.6e-89 R_Transcript_150634:2-703(+)
CACCTGGGGACGTTCGAGGTCCTACAGGAGAAGACCCCACCGGGTATATTGGACAAGTTTGGTTGGTGCACATGGGATGCATTTTACCTCAAGGTAGACCCGAATGGAGTCAAAGAAGGCGTTAAGAAGCTAACACAAGGCGGGTGCCCATTCGGGTTCGTTCTGATAGACGACGGGTGGCAGTCCATATGCCATGACTCTGACCCGATAACCCGGGAGGGCATGGACCTGACATCACCCGGTGAACAGATGCCATGTAGGCTAGTAAAATACCAGGAGAATCACAAGTTCCGGGACTACCAAAGTGTAGAAGAAAATTGCAAAGGGTTAGGGGGGTTTGTGAGGGACTTAAAGGAGGAATTTAGGACAATAGAACATGTGTATGTATGGCATGCATTGATGGGGTATTGGGGAGGGATAAGACCAAATGTGCCAAATATGCCAAAGTCAAGGGTGATTAGTCCTAAGTTGTCTAAGGGATTGCAGATGACTATGGAAGATTTGGCCGTTGATAAGATCGTCGAAAACGGCATCGGATTGGTGCCGCCGGAGATGGTGGGAGAGATGTATGAGGGCCTCCATTCGCACCTTCGTCAAGCTGGGATTGATGGGGTTAAAGTTGATGTTATTCATGTAAGTTTCTCCACACTTCCTCCATTGCTCTTTTGCTCATCTTGCTATTTTAGTCTTTTTTTTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_150634.p1 GENE.R_Transcript_150634~~R_Transcript_150634.p1 ORF type:5prime_partial len:234 (+),score=14.53,Raffinose_syn|PF05691.8|8.6e-89 R_Transcript_150634:2-703(+)
HLGTFEVLQEKTPPGILDKFGWCTWDAFYLKVDPNGVKEGVKKLTQGGCPFGFVLIDDGWQSICHDSDPITREGMDLTSPGEQMPCRLVKYQENHKFRDYQSVEENCKGLGGFVRDLKEEFRTIEHVYVWHALMGYWGGIRPNVPNMPKSRVISPKLSKGLQMTMEDLAVDKIVENGIGLVPPEMVGEMYEGLHSHLRQAGIDGVKVDVIHVSFSTLPPLLFCSSCYFSLFFC*

Click here to download the sequence:
Link to NCBI Protein BLAST