Transcript Information: R_Transcript_15085.p1


Annotated TAIR IDAT4G07960.1
Annotated Gene NameCellulose-synthase-like C12
Annotated Gene Symbol(s)ATCSLC12, CSLC12
Annotation TypeOrtholog
Chromosome Positionchr4:4802628-4805114 | Reverse length=699
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.913496945029
Replicate 29.3152600438506
Replicate 310.904897616197
Condition 2: 8 Hour
Replicate 19.1046033043278
Replicate 210.109638128198
Replicate 316.540974748437
Condition 3: 24 Hour
Replicate 118.624925300222
Replicate 214.662087600497
Replicate 316.122914860912


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15085.p1 GENE.R_Transcript_15085~~R_Transcript_15085.p1 ORF type:complete len:710 (+),score=80.47,Glyco_tranf_2_3|PF13641.2|4.1e-32,Glyco_trans_2_3|PF13632.2|9.1e+02,Glyco_trans_2_3|PF13632.2|3.4e-22,Glyco_trans_2_3|PF13632.2|7.5e+03,Glyco_transf_21|PF13506.2|3.6e-14,Glycos_transf_2|PF00535.22|2.6e-13,Chitin_synth_2|PF03142.11|0.0088,Chitin_synth_2|PF03142.11|0.63 R_Transcript_15085:341-2470(+)
ATGGCACCATGGTGGGGTGGTGGAGGGAGAATGAAGAAGGAGCAAAAGCACAGAGGGACACCAGTGGTGGTGAAAATGGAGAACCCCAACTGGTCCATTTATGAGATTAATGATCCCGATTATGAACAAGATGACGATGGTCACTTCCTAGATAACGACACCAACAACAATAAATCCAAAATGCGAGGCAAGAACCCCAAGCAGCTGACGTGGGTTCTTCTCCTCAAGGCCCACAGAACCGCCGGCTGTCTTTCTTCCCTCGCCACCGCCATAGTCGGCCTCGCTTCCGCCATCCGCCGCCGTGTCAAGTCCGGCCGTACAGATTCCGATGACGCCTCCTCTTCCTCCGCCACTCGCCGCCGCTTGCACGGCTTCATCAGGATGTTCCTCGGTGTCTCCGTCGTTCTCCTCCTCCTCGAGCTCGCCGCCTACTTCAAAGGCTGGCATTTATTCGGGTCCCCAAGTGCCCAGTTGGCGTACATTATCGCCACCACGGGGTCGTTTGGGATTCGGGACCTGTTTGATATCATTTATATTAAGTGGGTTCATGTACGGGTCGGGTATCTTGCCCCGCCCCTCCAGTGGCTCGCCAATGTCTGTACGGTACTTTTCCTCGTACAGACGTTGGACCGCCTTGTTCTTTGCTTGGGGTGCTTCTGGATCCGCCTTAAGCGGATCAAGCCCGTACCCAAGGTGGCCGGACTCGGGTCTGACCTTGAGTCCGGCCATGGGGATGGATACTTCCCCATGGTCCTCGTTCAGATCCCAATGTGCAACGAACGTGAGGTGTATCAGCAGTCAATAGCGGCTGTTTGCAGTTTGGATTGGCCGAAGTCGAAGTTGTTGATCCAAATTCTGGATGATTCGGATGATCTAACAACCCAAATGTTGATAAAGGAAGAGGTTCATAAATGGCAGGATGAAGGGGCCAATATTTTGTACCGGCATAGGGTAATTAGAGATGGGTACAAAGCTGGTAATCTCAAGTCTGCTATGAATTGTAGCTATGTCAAGGATTATGAATTTGTCGCCATTTTCGATGCCGATTTTCAACCTACCCCTGATTTCCTCAAACGTACCGTCATCCATTTCAAGGACAATGAAGAAGTGGGGTTAGTTCAAGCAAGATGGTCATTTGTGAACAAGGAAGAGAACCTATTAACAAGGCTACAGAACATAAACTTGGCATTCCACTTTGAAGTAGAGCAGCAAGTGAATGGGATATTCCTGAACTTCTTTGGGTTCAATGGGACGGCTGGTGTATGGAGAATTAAGGCGTTGGAAGAGTCAGGTGGTTGGTTGGAGAGGACCACTGTTGAAGATATGGACATTGCCGTGCGTGCTCATCTTAAAGGCTGGAAGTTTGTCTTCCTCAATGATGTTGAGTGTCAATGCGAGTTGCCAGAATCCTATGAAGCTTACAGGAAACAACAACATAGATGGCACTCGGGCCCTATGCAGTTATTTCGCCTTTGTTTACCTGATGTCATCAAGTCGAAGATATGCTTTTGGCAGAAGGCAAATTTGATTTTCCTGTTCTTCCTCTTGAGGAAGCTGATATTGCCCTTCTACTCTTTCACCCTCTTTTGCATTATTCTACCTATGACCATGTTCATCCCTGAGGCAGAGCTCCCGGCTTGGGTTGTCTGCTACATTCCGGCCACCATGTCCTTCCTCAACATCCTCCCGGCCCCAAAGTCCTTCCCGTTCATTGTGCCATACCTCCTTTTTGAGAACACGATGTCGGTTACAAAGTTCAATGCCATGATATCCGGTTTGTTCCAATTGGGCAGTGCCTATGAGTGGGTTGTAACAAAAAAATCTGGTCGTTCATCTGAGGGTGATCTCGTCGCCCTTGTTGAGAAAGAGTCGTTACACCAAAGAGGCGCTTCAGAATTTAGCTTAGGGGAAATGAAGGAGGAATTACATAAGCAGGAGCACAAGGGGTCCAAGAAGAAGAAGAAGCATAATAGGATTTACATGAAGGAACTGTCTCTAGCATTTCTTTTGTTGACTGCTGCTGCTCGTAGTCTTCTCTCAGCTCAGGGCATTCACTTCTACTTCTTACTCTTCCAAGGGATTTCGTTCTTGCTTGTCGGTCTCGACTTGATTGGTGAACAGGTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15085.p1 GENE.R_Transcript_15085~~R_Transcript_15085.p1 ORF type:complete len:710 (+),score=80.47,Glyco_tranf_2_3|PF13641.2|4.1e-32,Glyco_trans_2_3|PF13632.2|9.1e+02,Glyco_trans_2_3|PF13632.2|3.4e-22,Glyco_trans_2_3|PF13632.2|7.5e+03,Glyco_transf_21|PF13506.2|3.6e-14,Glycos_transf_2|PF00535.22|2.6e-13,Chitin_synth_2|PF03142.11|0.0088,Chitin_synth_2|PF03142.11|0.63 R_Transcript_15085:341-2470(+)
MAPWWGGGGRMKKEQKHRGTPVVVKMENPNWSIYEINDPDYEQDDDGHFLDNDTNNNKSKMRGKNPKQLTWVLLLKAHRTAGCLSSLATAIVGLASAIRRRVKSGRTDSDDASSSSATRRRLHGFIRMFLGVSVVLLLLELAAYFKGWHLFGSPSAQLAYIIATTGSFGIRDLFDIIYIKWVHVRVGYLAPPLQWLANVCTVLFLVQTLDRLVLCLGCFWIRLKRIKPVPKVAGLGSDLESGHGDGYFPMVLVQIPMCNEREVYQQSIAAVCSLDWPKSKLLIQILDDSDDLTTQMLIKEEVHKWQDEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVIHFKDNEEVGLVQARWSFVNKEENLLTRLQNINLAFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLKGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIKSKICFWQKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVALVEKESLHQRGASEFSLGEMKEELHKQEHKGSKKKKKHNRIYMKELSLAFLLLTAAARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD*

Click here to download the sequence:
Link to NCBI Protein BLAST