Transcript Information: R_Transcript_15109.p1


Annotated TAIR IDAT5G35700.1
Annotated Gene Namefimbrin-like protein 2
Annotated Gene Symbol(s)FIM2, FIM5
Annotation TypeOrtholog
Chromosome Positionchr5:13872833-13876432 | Reverse length=687
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.440076098701
Replicate 220.499346560291
Replicate 319.755366891356
Condition 2: 8 Hour
Replicate 113.728021915689
Replicate 213.528995078469
Replicate 317.077550820364
Condition 3: 24 Hour
Replicate 119.867333177821
Replicate 220.652335617952
Replicate 318.58512202704


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15109.p1 GENE.R_Transcript_15109~~R_Transcript_15109.p1 ORF type:complete len:676 (+),score=156.03,CH|PF00307.27|5.3e-16,CH|PF00307.27|1.1e-19,CH|PF00307.27|1.8e-16,CH|PF00307.27|1.5e-13,CAMSAP_CH|PF11971.4|0.76,CAMSAP_CH|PF11971.4|4.3,CAMSAP_CH|PF11971.4|0.17,CAMSAP_CH|PF11971.4|2.2,CH_2|PF06294.7|3.8e+02,CH_2|PF06294.7|10,CH_2|PF06294.7|0.078,CH_2|PF06294.7|2.5 R_Transcript_15109:313-2340(+)
ATGTCTAGCTTTGTGGGTGTCATTGTTTCTGATCAATCCTTACAAAGTCAATTCACTCAAGTCGAACTTCGTAGCCTCAAGTCTAAGTACAACACATTAAAGGCTCAATCTCCATCTGGTCATGTAATTGTTTCGGCTTTGCCGCCTGTTTTTGCAAAACTAAAGGGTATTACTGGATTATATACTGAAGATGAGGTAAGAGGTGCATTGGAGGATACATACCCTGATGTGACTCATGAGATTGATTTTGAATCTTTCCTAAGGGAATATCTTAACTTCCAAGGCCGAGCCAGTGGAAAAGGTGCAGGTTACAAACGTACTTCTTCAATCCTCAGACAATCGACCACCACCCATTTTCATGTCATTAATGAATCAGAGAAGGCCTCTTTTGTTGCACACATCAACAATTATCTGGCTGAAGATCCTTTCTTGAAGAACTATCTACCCATAGATCCAAAAACAAACCAGCTATTTGACCTTGCCAAAGATGGAGTGCTTATCTGTAAACTGATTAATGTTGCTGTGCCGGGAACAATAGATGAAAGAGCTATTAACACCAAAAAGACCCTTAACCCTTGGGAAAGAAATGAGAATCATACACTTTGTCTCAATTCTGCTAAGGCTATTGGTTGTACTGTGGTCAATATTGGGGCACAGGACTTAGTGGAGGGGCGAACTCATCTGGTTATGGGATTGATTTCTCAAATTATCAAGATTCAATTGTTAGCTGATCTCAATTTGAAGAAGACACCTCAACTGGTGGAGTTGGTTGATGAAAATCAGGAGGTGGAGGAGCTTATGAGTTTGCCTCCAGAAAAGGTCTTGTTGAAATGGATGAATTTCCAACTGAAGAAATCAGGGTATAAAAAGGAGGTCACAAATTTCTCTACTGATTTGAAGGATGGTGAAGCTTATGCTCATTTACTAAATGTGCTTGCACCAGAATACAGCACTAATGCTACTTTGGAAACCAAGGATCCCAATGAAAGAGCAAATTTGATTCTGGAGCAAGCAGAGAAATTGGATTGCAAGAGATATATCAGTCCAAAGGACATAGTAGAAGGATCAACAAATTTAAATTTGACTTTTGTTGCACAGATATTTCAGCACAGAAATGGTCTGACTGTTGATAATGAGAAGATATCCCTAGCAGAGACTGCATTAGATGACGACACTCAAACTTCTAGAGAGGAGAGATGCTTCCGGCTCTGGATTAACAGTCTTGGAGTTGCTACATATGTCAATAATTTGTTTGAGGATGTTAGAACAGGATGGGTTCTTTTGGAAGTGCTTGATAAAGTTTCACCGGGATCAGTTAACTGGAAGCTTGCCAGTAAACCTCCTATCAAGATGCCCTTCAAAAAAGTTGAAAATTGCAATCAAGTCGTTAATATTGGAAAAGACTTGAATTTTTCTCTTGTGAATGTTGCTGGAAATGACATAGTACAAGGAAACAAGAAGCTCATTCTAGCGTTTCTCTGGCAGCTGATGAGATTTACAATGCTGCAACTCCTGAAAAATTTGAGATCTTTCTCACAAGGAAGGGAGATTACAGATGCAGATATTCTCAATTGGGCAAATCAAAAGGTTAAGAGTTCAGGCAAATCTTCTCAAATGGAGAGCTTCAAGGATAAAAACCTCTCAAGTGGAATATTCTTCCTCGAACTTCTTAGTGCTGTGGAGCCAAGAGTGGTTAACTGGAAACTTGTCACCAAAGGGGAAGAGGAGGAGGACAAGAAGTTGAATGCAACTTACATCATCAGTGTCGCAAGAAAGCTTGGATGTTCTATATTCTTGTTGCCTGAGGATATCATAGAGGTTAACCAGAAGATGATCCTTACCTTAACAGCAAGCATTATGTACTGGAGTCTTCAGAATAAATCAGGGCAGCTGCCCATCGTTGAAGAAAGTACTTCAGAAGCATCACCGTCAGCAGAAGCCGACAGTGACGCACTGGCTGAAGAAGTCTCCAATTTGTCGGTCGATGATGCTGGCTCAGATAACATTCAATCACCACAAGCTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15109.p1 GENE.R_Transcript_15109~~R_Transcript_15109.p1 ORF type:complete len:676 (+),score=156.03,CH|PF00307.27|5.3e-16,CH|PF00307.27|1.1e-19,CH|PF00307.27|1.8e-16,CH|PF00307.27|1.5e-13,CAMSAP_CH|PF11971.4|0.76,CAMSAP_CH|PF11971.4|4.3,CAMSAP_CH|PF11971.4|0.17,CAMSAP_CH|PF11971.4|2.2,CH_2|PF06294.7|3.8e+02,CH_2|PF06294.7|10,CH_2|PF06294.7|0.078,CH_2|PF06294.7|2.5 R_Transcript_15109:313-2340(+)
MSSFVGVIVSDQSLQSQFTQVELRSLKSKYNTLKAQSPSGHVIVSALPPVFAKLKGITGLYTEDEVRGALEDTYPDVTHEIDFESFLREYLNFQGRASGKGAGYKRTSSILRQSTTTHFHVINESEKASFVAHINNYLAEDPFLKNYLPIDPKTNQLFDLAKDGVLICKLINVAVPGTIDERAINTKKTLNPWERNENHTLCLNSAKAIGCTVVNIGAQDLVEGRTHLVMGLISQIIKIQLLADLNLKKTPQLVELVDENQEVEELMSLPPEKVLLKWMNFQLKKSGYKKEVTNFSTDLKDGEAYAHLLNVLAPEYSTNATLETKDPNERANLILEQAEKLDCKRYISPKDIVEGSTNLNLTFVAQIFQHRNGLTVDNEKISLAETALDDDTQTSREERCFRLWINSLGVATYVNNLFEDVRTGWVLLEVLDKVSPGSVNWKLASKPPIKMPFKKVENCNQVVNIGKDLNFSLVNVAGNDIVQGNKKLILAFLWQLMRFTMLQLLKNLRSFSQGREITDADILNWANQKVKSSGKSSQMESFKDKNLSSGIFFLELLSAVEPRVVNWKLVTKGEEEEDKKLNATYIISVARKLGCSIFLLPEDIIEVNQKMILTLTASIMYWSLQNKSGQLPIVEESTSEASPSAEADSDALAEEVSNLSVDDAGSDNIQSPQAE*

Click here to download the sequence:
Link to NCBI Protein BLAST