Transcript Information: R_Transcript_151116.p1


Annotated TAIR IDAT5G16260.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ELF9
Annotation TypeOrtholog
Chromosome Positionchr5:5311363-5315496 | Forward length=519
E-Value3.8E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.825289429032
Replicate 219.618164867738
Replicate 320.165004524798
Condition 2: 8 Hour
Replicate 115.977263228125
Replicate 217.18075477373
Replicate 320.219072061705
Condition 3: 24 Hour
Replicate 126.81365515977
Replicate 223.034546447495
Replicate 327.592029267459


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_151116.p1 GENE.R_Transcript_151116~~R_Transcript_151116.p1 ORF type:complete len:518 (+),score=160.84,RRM_1|PF00076.18|1.3e-07,RRM_1|PF00076.18|1.5e-08,DUF4339|PF14237.2|4.8e-16,DUF4339|PF14237.2|1e+03,RRM_5|PF13893.2|3.5,RRM_5|PF13893.2|1.2e-07,RRM_6|PF14259.2|0.00041,RRM_6|PF14259.2|0.11 R_Transcript_151116:342-1895(+)
ATGTCGTTTACTGATGGTTCTTCAACCTCACAGCAACCTCCCACTGGCATGGTGAGCACAATAAACGAGAATTTGCAAACAAATACTGAAGTTGGGTGGTATATTCTTGATGGAAACCAGCAGCAGATTGGGCCCTACACAATATTGGAGTTGAGGGAACATTTTGTGAATGGATATCTGACAGAGAACACCCTTGTATGGGCTGAAGGAAGATCTGATTGGCAGCCACTGTCATCAGTTCCAGAGTTAATGACTGGAGTCTATTGTCACGGAACTGAATCTTCAGCTTCAACTGAGGAGGTTCCTTCTAATGTTTTTCCAAGTGAGACAAGACATACATATAGTAAGTCTACAGCAGCACCGACCAACGATGATGATGAGTTTGAGAAATTCCAGAAGGAAGTGAAAAAGGCAGAGGCTGAAGCTGAGATGCTGAAAAATGGCTCTGCTTCAGGTGATATAGATGGCATTGATCTAGATAGACCATCAACACCACCTGAGGGAGAGGATGAATTTACTGATGATGATGGGACTAGGTATAAGTGGGACCGCAATCTGAGAGCCTGGGTGCCACAGGATACTGAAGCCTGTGAAAAGGAGGGATATGGATTAGATGAGATGACATTTTTCAAAGAAGAGGAGGTATTCCCAACACTTCCAGTTGATGATGCTGTTGAAAATGAAGGAGAAAAAAGTGTCAGTGGACCTGTGGAAGAAGAAGACTCCAAACAAAGTGCAAAGAGAAAAGAACCAGAAAAGAAGAGTGAAAAAAAGGAAGCAAACAAACCACCTGACAGTTGGTTCGAGTTAAAACACAACACACATGTCTATGTGACGGGATTGCCAGATGATGTCACTTTTGACGAAGTGGTGGAGGTTTTTTCCAAGTGTGGCATTATAAAGGAGGATCCTGAGACCAAAAAGCCCCGTGTGAAGCTCTATTTTGACAAGAAGACAGGACGGAAGAAGGGAGATGCTCTTGTTACTTACCTTAAGGAGCCATCTGTAGCCTTGGCAATCCAATTATTGGACGGAACGCCTTTTCGACTTGGAGGAAAAGTTCCTATGTCAGTATCCCAAGCAAAATTTGAACAGAAAGGGGAGAAATTTATTCCGAAACAAACAGATAAGAGGAAGAAAATGAAACTAAAGAAGGTTGAAGACAAGATGCTTGGATGGGGTGGTCGTGATGATGCAAAACTTATGATTCCAGCTACCATTGTCCTCAGTAATATGTTTACACCTGCAGAAATGAGAGAAGATTTAAATTTACGTGATGAATTGGAGGCAGATGTCCGAGAGGAATGTGTCAAGCTTGGTCCAGTGGATTCAGTCAAGGTCTGTGAGAATAACCCACATGGAGTCGTGTTGGTAAGATACAAGGACAGAAAAGATGCCCAGAAGTGTATACAATTGATGGATGGAAGATGGTTTGGTGGGAAACAAATACATGCTGTTGAAGATGATGGTTCTGTCAACCATGCTTTGCTCCGGGACTACAGCGATGAAGAGGAACGGCTAGAGAAGTTTGCTGCAGAGCTTGAGGCTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_151116.p1 GENE.R_Transcript_151116~~R_Transcript_151116.p1 ORF type:complete len:518 (+),score=160.84,RRM_1|PF00076.18|1.3e-07,RRM_1|PF00076.18|1.5e-08,DUF4339|PF14237.2|4.8e-16,DUF4339|PF14237.2|1e+03,RRM_5|PF13893.2|3.5,RRM_5|PF13893.2|1.2e-07,RRM_6|PF14259.2|0.00041,RRM_6|PF14259.2|0.11 R_Transcript_151116:342-1895(+)
MSFTDGSSTSQQPPTGMVSTINENLQTNTEVGWYILDGNQQQIGPYTILELREHFVNGYLTENTLVWAEGRSDWQPLSSVPELMTGVYCHGTESSASTEEVPSNVFPSETRHTYSKSTAAPTNDDDEFEKFQKEVKKAEAEAEMLKNGSASGDIDGIDLDRPSTPPEGEDEFTDDDGTRYKWDRNLRAWVPQDTEACEKEGYGLDEMTFFKEEEVFPTLPVDDAVENEGEKSVSGPVEEEDSKQSAKRKEPEKKSEKKEANKPPDSWFELKHNTHVYVTGLPDDVTFDEVVEVFSKCGIIKEDPETKKPRVKLYFDKKTGRKKGDALVTYLKEPSVALAIQLLDGTPFRLGGKVPMSVSQAKFEQKGEKFIPKQTDKRKKMKLKKVEDKMLGWGGRDDAKLMIPATIVLSNMFTPAEMREDLNLRDELEADVREECVKLGPVDSVKVCENNPHGVVLVRYKDRKDAQKCIQLMDGRWFGGKQIHAVEDDGSVNHALLRDYSDEEERLEKFAAELEAE*

Click here to download the sequence:
Link to NCBI Protein BLAST