Transcript Information: R_Transcript_151174.p1


Annotated TAIR IDAT1G04590.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1258760-1261411 | Reverse length=384
E-Value1E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.968058647966
Replicate 28.7676858881245
Replicate 310.06889564666
Condition 2: 8 Hour
Replicate 18.4310304213958
Replicate 210.15659101944
Replicate 310.372348925935
Condition 3: 24 Hour
Replicate 112.445990731503
Replicate 212.522216586225
Replicate 313.950405185055


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_151174.p1 GENE.R_Transcript_151174~~R_Transcript_151174.p1 ORF type:complete len:273 (+),score=59.27 R_Transcript_151174:295-1113(+)
ATGTTGAAATCAGCAGCAGTATACTTGTTTCGTCAGCACACACAGCTTGGGATGCTAAGATGTCAAGCCCCAAGAATGTGCTTCAGTACAATGCTCCAATCCGAGGGTCTAAACCAGCTTCAATCAAATGATTTTGGCAAGATTTATAGAAATGAGTTGAGCTTCCCCGTGGGACAGAAGATCTCAAGGAGAGAAAAGATCAAGTTTTTGATCAAAACTCTTTTAGATCTTGAAAACAGTAAAGATGCTGTCTATGGAACACTTGATGCTTGGGTAGCATGGGAGCAAAACTTTCCTATTGCAAGGCTCAAGAATGTAATACTTGCCTTGGAGAAGGAGCAACAATGGCACAGAGTCGTACAGGTCATAAAATGGATGTTAAGCAAAGGTCAAGGTAACACATTGGAAACTTACCAGCAACTACTACGGGCTTTGGATATGGACCACAGAGCTGAAGAAGCGCATAGTTTCTGGATGAAAAAGATTGGCAATGATCTTCATTCAGTTCCTTGGCAAACATGTCGTCTTATGATATCTATTTATTATAGAAACAATATGTTGGACCGTCTTGTCAAGCTTTGTAAGGGTCTTGAGGCTTTTGATCGTAAACCTCCTGAGAAGTCAATAGTGCAGAAGGTGGCAGATGCATATGAATCCTTGGGCATGATGAATGACAAAGAAAGGATCTTGCAAAAGTATGCTGATCTCCTCAGCAAGACAAGGAAAGAATCTGATAAGAAATCCAAGAGAGTGAAGTCTAAAAGGAAGGATTCTTCATCAGCTATTAGGGACCGCCCTGCTAAGGCTTCAGATACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_151174.p1 GENE.R_Transcript_151174~~R_Transcript_151174.p1 ORF type:complete len:273 (+),score=59.27 R_Transcript_151174:295-1113(+)
MLKSAAVYLFRQHTQLGMLRCQAPRMCFSTMLQSEGLNQLQSNDFGKIYRNELSFPVGQKISRREKIKFLIKTLLDLENSKDAVYGTLDAWVAWEQNFPIARLKNVILALEKEQQWHRVVQVIKWMLSKGQGNTLETYQQLLRALDMDHRAEEAHSFWMKKIGNDLHSVPWQTCRLMISIYYRNNMLDRLVKLCKGLEAFDRKPPEKSIVQKVADAYESLGMMNDKERILQKYADLLSKTRKESDKKSKRVKSKRKDSSSAIRDRPAKASDT*

Click here to download the sequence:
Link to NCBI Protein BLAST