Transcript Information: R_Transcript_151248.p1


Annotated TAIR IDAT3G47180.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17372821-17373453 | Reverse length=210
E-Value7.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7692161170357
Replicate 29.2652713580817
Replicate 310.271348530659
Condition 2: 8 Hour
Replicate 18.8881075609217
Replicate 29.7082832193048
Replicate 39.6248753823404
Condition 3: 24 Hour
Replicate 112.255057238988
Replicate 211.616292938809
Replicate 313.553240624627


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_151248.p1 GENE.R_Transcript_151248~~R_Transcript_151248.p1 ORF type:5prime_partial len:281 (+),score=64.33,zf-RING_2|PF13639.2|3.7e-11,zf-rbx1|PF12678.3|2.9e-09,zf-RING_11|PF17123.1|1.1e-05,zf-RING_11|PF17123.1|43 R_Transcript_151248:3-845(+)
TTACAAGGTTGGCCAATCGAAAGCAACCTCGGTTTTTTTTTTTTTTTTTTTCTGGGTTTGTTGGATGATATAATACTCATACCACTTGAAGTTGAAAGCTGCAAATCTCAGATCAGATCATTTGTGTATAGAAAAGAACTTTCAAATCATTTGTATCCAAAAGCCGCTGAGCTGTGTCAGAAGAAGAGGAAGATGGAGAACAATGACGAACAGATGAGACAGCAGGAGGCATCGAAGCAGCAACCGGTAAACATGGAGCAAATTGATTCTGATCATGCTCTAGCTGTTGCTTTGCAAGAACAGGAAAGTGCTTATACAACGCTTGAGAGCACTGAAAGTGATATGGAGGATGAATATGACGAGGAAGATGAAGACGAAGAGGTAGTTGGAAGCTCCTCATCTTATGGCTATGATGGTAACTTTGAGAGCCAGGCATTTGAAGCTGAACTAGAATTTATCGAGGATGATGGAGAAGGTGGCTACAGTGATGAGATCGAAGAAGATGATATTGATCCAGATGAGATGTCCTATGAAGAGCTGATAGCCTTGGGAGAAATTGTTGGAGAGGAGAATCGAGGACTATCCGTTGAAGAAATTACATCATCTTTATCACCCTATGTCTACAAAAATGTTCATCGCAAATCTGTAATTGATCGTTGTGTGGTATGTCAAATAGAGTATGAAGAAGGGGAACAACTAGCTGCACTAAAGTGTGAACATCCATTTCATACTGAATGTATAAATCAGTGGCTTCAGATTAAGAAGGTCTGTCCGATATGTTCGATGGAAGTGACACCACGAAGCAATCTCGAATTCTTGAAATCTGAGAAGATTGACACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_151248.p1 GENE.R_Transcript_151248~~R_Transcript_151248.p1 ORF type:5prime_partial len:281 (+),score=64.33,zf-RING_2|PF13639.2|3.7e-11,zf-rbx1|PF12678.3|2.9e-09,zf-RING_11|PF17123.1|1.1e-05,zf-RING_11|PF17123.1|43 R_Transcript_151248:3-845(+)
LQGWPIESNLGFFFFFFLGLLDDIILIPLEVESCKSQIRSFVYRKELSNHLYPKAAELCQKKRKMENNDEQMRQQEASKQQPVNMEQIDSDHALAVALQEQESAYTTLESTESDMEDEYDEEDEDEEVVGSSSSYGYDGNFESQAFEAELEFIEDDGEGGYSDEIEEDDIDPDEMSYEELIALGEIVGEENRGLSVEEITSSLSPYVYKNVHRKSVIDRCVVCQIEYEEGEQLAALKCEHPFHTECINQWLQIKKVCPICSMEVTPRSNLEFLKSEKIDT*

Click here to download the sequence:
Link to NCBI Protein BLAST