Transcript Information: R_Transcript_151498.p1


Annotated TAIR IDAT5G66520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26551879-26553741 | Forward length=620
E-Value9E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81124270909861
Replicate 20.77764075615919
Replicate 30.59387838212247
Condition 2: 8 Hour
Replicate 10.40809774912075
Replicate 20.57972656625296
Replicate 31.176493280951
Condition 3: 24 Hour
Replicate 11.4880060240179
Replicate 21.2252921605876
Replicate 31.499713098917


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_151498.p1 GENE.R_Transcript_151498~~R_Transcript_151498.p1 ORF type:complete len:540 (+),score=88.31,PPR_2|PF13041.2|7.5e-11,PPR_2|PF13041.2|9e-08,PPR_2|PF13041.2|4.4e-08,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|0.059,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|1.2e+03,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|4.7e-08,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|0.0027,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.013,PPR|PF01535.16|0.0064,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|39,PPR_1|PF12854.3|99,PPR_1|PF12854.3|74,PPR_1|PF12854.3|1.5e-07,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|81,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|3.7e+03,PPR_3|PF13812.2|50,PPR_3|PF13812.2|9.3e+03,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.09,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|35 R_Transcript_151498:67-1686(+)
ATGACTTCTCTTGGCTCCAAGTATTTGAAATCTAGCAAATTTGTTCTATCTCTCCTTGAACACCACCAGTGTCTCTCCATCCCTCAACTCAAGCAACTCCACTGTCACCTAACAATCACTGGCACCATTTCTGATTCTTTTGCAGCTGGAAAACTCGTTTCTTCCTTTGCGAACCATCCCGCCCATGTATCATATTCTTATCACCTCCTTCTTCAAGTTCCGAATCGCTCCACTTACATGTGGAACTCCCTGATCAAAATTTTCAGTGAAAAAAACGAACTCATCAAGGCATTGTCTCTTTATAAGGATATGTTAGATTCTGGGTCTCACCCAAATAGTCATACTTTCTCATTCCTGATTAAAGCTTGCATTGATCTATGTGATTTATCACTTGGGTTGATGTTACATTCTCAGTCTATTATGTTGGGGTGGGATGGTTATAACTTTGTGCAAAATGGGTTGATACATTTGTATGCTATTTGTAATGCGGTTGATTTGGGTCCCAAGCTGTTTGATGCTAGTTCTTGCAAGGATGTTGTCACTTGGACTGCTGTGGTTAATGGGTACGTGAAAGGTGGTCGGGTCGAGGTTGCACGAGAGCTGTTCGATGAAATGCCTGAGAGAAATGTGGTTTCTTGGGGTGTAATGATTACAGGGTATGCTCAAATGGGGTTCTTTAAAGAGGCTCTTGAGCTCTTTTATGAGATGCAGGTTTCTGGGTTTCGGCCTAATCATGCTTCCATTGTGGGGGCGCTCACGGCTTGTGCTTCGCTTGGGGCTTTGGAGCAAGGGAGGTGGATACATGCATACATGGATCGGATTGGGATGGGTTTGGATGCCAAATTAGGGACTGCCCTCGTTGATATGTACGTGAAATGTGGGTGCATTGAGATGGCGAGTAGTGTGTTTGAGGACATGCCATGTAGGGATGTGTTCACTTTCACTTCTTTGATATCTGGCCTATCGAACCATGGGCTGAGTAAGAGAGCAATCCAGTTATTCAGAAGGATGCAGAACGAAGGGATTAGTCCAAATGGGGTTACATTCATTTGTGTCCTGGCTGCATGTAGTCGAACGGGTTTGGTAGATGAGGGGTCGCAAATATTTGAGAGCATGAGAGACCGATATGGGATTGAGCCAGGGATTGAGCACTATGGCTGTTTGGTTGACCTCCTAGCGAGAGCAGGAATGCTGCAAGAGGCAGAACAGCTTGTGAGGAAGATGTCAATGGTACCGGATTCTTATGTTTTTGGTGCATTGCTTAATGCTTGTAGAGTTTATGGCAATGTCGCAATAGGGGAAGAGACTGTTAAGCAATTGATGGAGCAAGGTTTAGACTATAGTGGAGTTCATACCCTACTCTCGAATATTTATGCATCGGCAAACAAATGGGATGGAGTTGCCAAGGTAAGGGAGGCTATGGAAGAGAAGAACATGAGAAAGGAGCCAGGGTCCAGTTTGATTGAAGTAGATGGTGCTGTTTCCGAATTTGGTGCTGGACATAGGTCTCATTTGCTAATGGATGACATTATGTTGTCATTGCTTCAAATACACAAGCACTTACGGTCATTTTGGTTGGATCATAATATTAAACACAACACTGAAAGTACTTTGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_151498.p1 GENE.R_Transcript_151498~~R_Transcript_151498.p1 ORF type:complete len:540 (+),score=88.31,PPR_2|PF13041.2|7.5e-11,PPR_2|PF13041.2|9e-08,PPR_2|PF13041.2|4.4e-08,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|0.059,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|1.2e+03,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|4.7e-08,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|6.2e+03,PPR|PF01535.16|0.0027,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.013,PPR|PF01535.16|0.0064,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|39,PPR_1|PF12854.3|99,PPR_1|PF12854.3|74,PPR_1|PF12854.3|1.5e-07,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|81,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|3.7e+03,PPR_3|PF13812.2|50,PPR_3|PF13812.2|9.3e+03,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.09,PPR_3|PF13812.2|0.062,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|35 R_Transcript_151498:67-1686(+)
MTSLGSKYLKSSKFVLSLLEHHQCLSIPQLKQLHCHLTITGTISDSFAAGKLVSSFANHPAHVSYSYHLLLQVPNRSTYMWNSLIKIFSEKNELIKALSLYKDMLDSGSHPNSHTFSFLIKACIDLCDLSLGLMLHSQSIMLGWDGYNFVQNGLIHLYAICNAVDLGPKLFDASSCKDVVTWTAVVNGYVKGGRVEVARELFDEMPERNVVSWGVMITGYAQMGFFKEALELFYEMQVSGFRPNHASIVGALTACASLGALEQGRWIHAYMDRIGMGLDAKLGTALVDMYVKCGCIEMASSVFEDMPCRDVFTFTSLISGLSNHGLSKRAIQLFRRMQNEGISPNGVTFICVLAACSRTGLVDEGSQIFESMRDRYGIEPGIEHYGCLVDLLARAGMLQEAEQLVRKMSMVPDSYVFGALLNACRVYGNVAIGEETVKQLMEQGLDYSGVHTLLSNIYASANKWDGVAKVREAMEEKNMRKEPGSSLIEVDGAVSEFGAGHRSHLLMDDIMLSLLQIHKHLRSFWLDHNIKHNTESTLF*

Click here to download the sequence:
Link to NCBI Protein BLAST