Transcript Information: R_Transcript_151546.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value4.2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.562331951189
Replicate 214.450394992393
Replicate 317.921153531107
Condition 2: 8 Hour
Replicate 118.00431246121
Replicate 213.942667500974
Replicate 320.393868402905
Condition 3: 24 Hour
Replicate 116.340556909131
Replicate 216.087365308421
Replicate 316.995158933356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_151546.p1 GENE.R_Transcript_151546~~R_Transcript_151546.p1 ORF type:5prime_partial len:170 (+),score=9.42,ATG27|PF09451.6|3.6e-12 R_Transcript_151546:3-512(+)
TTGTATACAAGCTACTATGTTTGCACAGCTATTGGCCGTGACTTGAAGTTTGAAATCAATCTAATGGATAAAAGGACTCCAGATTTGGGTGTCAACGTTACGATGTCAAGCAATAGCCACGGAGTCAACTGTTCACTTTCTATCTCTGTCGTATGTGACTTAAATGGTTTTAAGGAGCCGCAGTCATTTGAAAAATTAGGGACCTGTAATTATGCTACTGTGCTGAGGCATCCGTCTGGCTGCCCCAAGGTTGTATCAGTTCATGGGAAAGGATGGGGTTGGTTTGGTGTTCTTTTGACAATATTATTATGTATCCTTGTAGCCTACCTGCTGAGTGGTGCAGTGTACCGTTATTTCTTCCTTGGAATTCGGGGTTTAGATGTTATCCCAAACTTAGACTTTTGGATTAGCATACCACATAGAACAAAGACTTTATTCATGTCATTGGTGCAAAGGTTTAGAGGGCCTACTTACCACCACAGAAGCTCTTATTCACCTGTTAACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_151546.p1 GENE.R_Transcript_151546~~R_Transcript_151546.p1 ORF type:5prime_partial len:170 (+),score=9.42,ATG27|PF09451.6|3.6e-12 R_Transcript_151546:3-512(+)
LYTSYYVCTAIGRDLKFEINLMDKRTPDLGVNVTMSSNSHGVNCSLSISVVCDLNGFKEPQSFEKLGTCNYATVLRHPSGCPKVVSVHGKGWGWFGVLLTILLCILVAYLLSGAVYRYFFLGIRGLDVIPNLDFWISIPHRTKTLFMSLVQRFRGPTYHHRSSYSPVNF*

Click here to download the sequence:
Link to NCBI Protein BLAST