Transcript Information: R_Transcript_15183.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.103659195137
Replicate 26.4473488147016
Replicate 38.9313138506211
Condition 2: 8 Hour
Replicate 110.635274674056
Replicate 28.6281382457908
Replicate 312.21108350826
Condition 3: 24 Hour
Replicate 112.661578531643
Replicate 29.802337284701
Replicate 313.619016249625


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15183.p1 GENE.R_Transcript_15183~~R_Transcript_15183.p1 ORF type:complete len:495 (+),score=115.56,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|7.9,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.037,PPR|PF01535.16|26,PPR|PF01535.16|0.12,PPR|PF01535.16|0.02,PPR|PF01535.16|0.39,PPR|PF01535.16|0.0024,PPR|PF01535.16|1.3e+02,PPR_1|PF12854.3|19,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.0045,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|19,PPR_1|PF12854.3|4.3e-06,PPR_1|PF12854.3|84,PPR_1|PF12854.3|41,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|13,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|26,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|3.1e+02 R_Transcript_15183:426-1910(+)
ATGGCTGAAAGTTCTAGCTTTAAATACTCTTCATCAACTATCCCATATGTATCTAAACCCCGATACCCAGAAAAATTAGACCATGAAAATCAAAGGAGGAAAAAGTTCATGACTTATCTCGATGTTCCTTATGTGACCCCTAGAATTAGAATTCTATGTGATATAATTGCTGAAACTCCACCTTCTGAGGTTGAAAATGCTCTTCTTAGTAGTGGTATCACTCCAATCACCGAGCTTGTTGAGGATGTCCTTAAGCTCTCCTATGGCAGCCCTGATGCTGCTATCATCTTATTTCGTTGGGCCGGGTTCCACCACAAGCCTTCTGTTTATGCTTGGAATATGATGGTTGATTTGCTAGGCAAGAATGAGAAGTTTGACAAAATGTGGGATGCCATTCGCTCTATGAAGCGAGAAGGGTTGGTCTCCCTCGCCACCTTTGTGTCTGTGTTTGGTAGCTATTGTGAGGTGGGCAGGTCTGAGGATGCGATCATGACATTTGAAGTGATGGATAAGTATGGCATTGAGCCCGACGTGGTTGCTGTGAACTCCTTGTTGAGCGCCATGTGCCAGGAGAAGGATCAAGTCCAGAAGGCATATAGTTTCTTTGACAAGATCAAGGTGAAGATTCCACCTGATGGGGACTCGTTTGCAATTCTCTTGGAGGGTTGTGAGAAGGAGGGGAATGTTACCAAGGCCAAGGCTACATTTGGGGAGATGGTGGTTCGTGTTGGCTGGGATGCCAAGAATATGCCGGCTTACAATGCTTTTTTAATGACACTTGTTCGTGGATCACAAGTTGATGAGGCTATCAAGTTTCTCCATGTTATGAAGGGGAAAGGCTGCTTGCCAGGTTTGAAATTCTTTTCCCATGCTCTTGATATTCTTGTTAAGCAGAACGATTCTTCCCATGCTGGTCCCTTGTGGGATACAATGGTGGGGAGCGGCATAATGCCTAATTTGATCATGTTCAATGCCATCATTGGCCTGGTTTGCTACAACAATGACATAGACAATGCCTTCCGCTTCCTTGACGACATGCCATTCTATGGAGTTTTCCCTGAATCTCTAACTTATAACATGATCTTCAAATGTCTGATAAACAACAAGAAGGTTCGTGAGGTGGCCTCCTTTTTCAAAGAGATGGTGAAGAATGAATGCCCTCCAACACATGCGAATTGTGCTGCAGCAATAGAGATGCTGTTCAATCGGGATGATCCAGAGACAGGAATTGAGATTTGGGACTATGTGCTTGATAATAATGTCATGCCTATTGATGAGAGTGCAAATATGCTGCTCCTTGGGCTTTGCAAGATAGGTCGTTTCTCAGAATTGAGGAGGTTTGCCACTGACGTGCTGGATCAAAGGATTATCATTCATGGAACCACAATGGAAAAACTGCGCAATGCATTCTACAAAGAAGGCCGAAGTGCGAGGGATACATTCGACAGTCTTGAGAGAAGGTGGAAGGCTTCATACCCTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15183.p1 GENE.R_Transcript_15183~~R_Transcript_15183.p1 ORF type:complete len:495 (+),score=115.56,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|7.9,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.037,PPR|PF01535.16|26,PPR|PF01535.16|0.12,PPR|PF01535.16|0.02,PPR|PF01535.16|0.39,PPR|PF01535.16|0.0024,PPR|PF01535.16|1.3e+02,PPR_1|PF12854.3|19,PPR_1|PF12854.3|7.9,PPR_1|PF12854.3|0.0045,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|19,PPR_1|PF12854.3|4.3e-06,PPR_1|PF12854.3|84,PPR_1|PF12854.3|41,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|13,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|26,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|3.1e+02 R_Transcript_15183:426-1910(+)
MAESSSFKYSSSTIPYVSKPRYPEKLDHENQRRKKFMTYLDVPYVTPRIRILCDIIAETPPSEVENALLSSGITPITELVEDVLKLSYGSPDAAIILFRWAGFHHKPSVYAWNMMVDLLGKNEKFDKMWDAIRSMKREGLVSLATFVSVFGSYCEVGRSEDAIMTFEVMDKYGIEPDVVAVNSLLSAMCQEKDQVQKAYSFFDKIKVKIPPDGDSFAILLEGCEKEGNVTKAKATFGEMVVRVGWDAKNMPAYNAFLMTLVRGSQVDEAIKFLHVMKGKGCLPGLKFFSHALDILVKQNDSSHAGPLWDTMVGSGIMPNLIMFNAIIGLVCYNNDIDNAFRFLDDMPFYGVFPESLTYNMIFKCLINNKKVREVASFFKEMVKNECPPTHANCAAAIEMLFNRDDPETGIEIWDYVLDNNVMPIDESANMLLLGLCKIGRFSELRRFATDVLDQRIIIHGTTMEKLRNAFYKEGRSARDTFDSLERRWKASYPL*

Click here to download the sequence:
Link to NCBI Protein BLAST