Transcript Information: R_Transcript_15185.p2


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value1.1E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.607277682678
Replicate 216.406411488084
Replicate 311.55991176364
Condition 2: 8 Hour
Replicate 127.276114673792
Replicate 225.793017193554
Replicate 328.747085656938
Condition 3: 24 Hour
Replicate 122.156953487203
Replicate 224.77369777709
Replicate 317.510163749518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15185.p2 GENE.R_Transcript_15185~~R_Transcript_15185.p2 ORF type:complete len:430 (+),score=89.39,XendoU|PF09412.6|2e+03,XendoU|PF09412.6|2.4e-95 R_Transcript_15185:2062-3351(+)
ATGGAGGGCTTAATCAAGGGTTTGGTAGACGTGGCTATTGGCCACGATGGCAGGGATGATGATGACAACAACAACAACAACAACAATCAATTTCACCGCAATTCTGAGTCACTTGAAGAACGTTCTAGATCCACCTGGGAAGAGGTAGTTTCTGGAGATCAAGATAACGACGATCCAGATAGAAATCGATATGACGATGATCGAAGACGTAATCGCCCTAACAGAATGGGTTATGGAGATGGTGATGCTGATGCTGATCAGTATTCAGAGTTCAGTGAATCGAGGCCTAGTTCTCGCCCTCATCATCAGGAAGTAGGGGAAGCCACTGATGGTTGGCAAACTGCCGGCAAGAAGCATCACAAGCAACCACAGAAGATACATATGGACCATTGGAATTCGTACAAAAGACCTCCCAGTGAGCAGGAATATTCTGAGGAACTCAGTCATGTTGCTGAACTGGAGCCATCTGAAGCGGAGCTTGCTGACTATAAAAGTGCCTGTGCAAAGCTTTGGGAACTAGATTTCAACCGCTTGGTTCCTGGTAAGGATTATGAAATTAATGTTGGTGAGGGCAAGAGGGTCCATGACAGGGGAGATATGGCAGATGAAAATCTCTTTACCTGGGTCAGTGAAGATGTACTCAGAAGGCCTACATTTTCTCGTTTCTGTGCCCTCCTGGACAATTACAACCCCAATCAAGGATGTAAGGAGAATGTGACAGCTAATGAAAGACAAGAACAAGCTGCCTTCATAGAAGAGATTAGTAGAACTGCGCCTATCAAGTACCTTTACAAGTATCTATCTTGCAACAGAATTTTCACAGAGAATTACGAAGAATTCAAGGGTATGTTGACAGACCTCTGGTTCACTCTTTATGGTCGTGGTGGTACCTCTGGCTCATCTTCTTCTTTTGAGCATGTTTTTGTTGGCGAAATCAAGAGTCGCGGGGAACAAGAAGTGTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAGGGTAATGCTGACTATCAAGGTTACATCTTGCCTCGCAGACGTGGGGAATTTCCGGATTCCGAATCACAGTTGCTCACTGTTCAGTTTGAGTGGCATGGAGTCCTGAAAAATATCTCAAGCATGTTCATGGGAGTAAGCCCTGAGTTTGAATTAGCCCTCTATACACTGTGTTTCTTTGCAGGCGGGGACGACAACCACATTGAAGTTGGTCCATACCCAGTTAACATCAAGTGCTATCGTCTGGCAAACAAAATTGGTTCTGCCTTCCCAATGGCAGAATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15185.p2 GENE.R_Transcript_15185~~R_Transcript_15185.p2 ORF type:complete len:430 (+),score=89.39,XendoU|PF09412.6|2e+03,XendoU|PF09412.6|2.4e-95 R_Transcript_15185:2062-3351(+)
MEGLIKGLVDVAIGHDGRDDDDNNNNNNNQFHRNSESLEERSRSTWEEVVSGDQDNDDPDRNRYDDDRRRNRPNRMGYGDGDADADQYSEFSESRPSSRPHHQEVGEATDGWQTAGKKHHKQPQKIHMDHWNSYKRPPSEQEYSEELSHVAELEPSEAELADYKSACAKLWELDFNRLVPGKDYEINVGEGKRVHDRGDMADENLFTWVSEDVLRRPTFSRFCALLDNYNPNQGCKENVTANERQEQAAFIEEISRTAPIKYLYKYLSCNRIFTENYEEFKGMLTDLWFTLYGRGGTSGSSSSFEHVFVGEIKSRGEQEVSGFHNWLQFYLEEAKGNADYQGYILPRRRGEFPDSESQLLTVQFEWHGVLKNISSMFMGVSPEFELALYTLCFFAGGDDNHIEVGPYPVNIKCYRLANKIGSAFPMAEC*

Click here to download the sequence:
Link to NCBI Protein BLAST