Transcript Information: R_Transcript_15187.p2


Annotated TAIR IDAT4G17100.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9610164-9612513 | Reverse length=437
E-Value9.3E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.72725121747
Replicate 215.957188316386
Replicate 321.430525617734
Condition 2: 8 Hour
Replicate 126.063842910512
Replicate 235.876792642969
Replicate 342.394095026726
Condition 3: 24 Hour
Replicate 128.926837106907
Replicate 218.03630060385
Replicate 328.454016092967


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15187.p2 GENE.R_Transcript_15187~~R_Transcript_15187.p2 ORF type:complete len:450 (+),score=93.34,XendoU|PF09412.6|2.7e-95 R_Transcript_15187:2063-3412(+)
ATGGAGGGCTTAATCAAGGGTTTGGTAGACGTGGCTATTGGCCACGATGGCAGGGATGATGATGACAACAACAACAACAGTCAATTCCACCACAATTCTGCGTCACTTGAAGAACGTTCTAGATCCACCTGGGAAGAGGTAGTTTCTGGAGATCAAGATAACGACGATGCAGATAGAAATCGATATGATGATGGTCGAAGACGTAATCGCCCTAGCAGAGTGGGTTATGGAGATGGTGATGCTGATGCTGATCAGTATTCAGAGTTCAGTGAATCGAGGCCTAGTTCTCGCCCTCATCATCAGCCTGTGCATGGAAATTATTCACCGGATGAAGACTGTGAGAGGCATGCATATAGCCAAAACCAAACGGAAGTAGGGGAAGCCACTGATGGTTGGCAAACTGCCGGCAAGAAGCATCACAAGCAACCACAGAAGATACATATGGACCATTGGAATTCGTACAAAAGACCTCCCAGTGAGCAGGAATATTCTGAGGAACTCAGTCATGTTGCTGAACTGGAGCCATCTGAAGCGGAGCTTGCTGACTATAAAAGTGCCTGTGCAAAGCTTTGGGAACTAGATTTCAACCGCTTGGTTCCTGGTAAGGATTATGAAATTAATGTTGGTGAGGGCAAGAGGGTCCATGACAGGGGAGATATGGCAGATGAAAATCTCTTTACCTGGGTCAGTGAAGATGTACTCAGAAGGCCTACATTTTCTCGTTTCTGTGCCCTCCTGGACAATTACAACCCCAATCAAGGATGTAAGGAGAATGTGACAGCTAATGAAAGACAAGAACAAGCTGCCTTCATAGAAGAGATTAGTAGAACTGCGCCTATCAAGTACCTTTACAAGTATCTATCTTGCAACAGAATTTTCACAGAGAATTACGAAGAATTCAAGGGTATGTTGACAGACCTCTGGTTCACTCTTTATGGTCGTGGTGGTACCTCTGGCTCATCTTCTTCTTTTGAGCATGTTTTTGTTGGCGAAATCAAGAGTCGCGGGGAACAAGAAGTGTCAGGCTTCCACAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAGGGTAATGCTGACTATCAAGGTTACATCTTGCCTCGCAGACGTGGGGAATTTCCGGATTCCGAATCACAGTTGCTCACTGTTCAGTTTGAGTGGCATGGAGTCCTGAAAAATATCTCAAGCATGTTCATGGGAGTAAGCCCTGAGTTTGAATTAGCCCTCTATACACTGTGTTTCTTTGCAGGCGGGGACGACAACCACATTGAAGTTGGTCCATACCCAGTTAACATCAAGTGCTATCGTCTGGCAAACAAAATTGGTTCTGCCTTCCCAATGGCAGAATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15187.p2 GENE.R_Transcript_15187~~R_Transcript_15187.p2 ORF type:complete len:450 (+),score=93.34,XendoU|PF09412.6|2.7e-95 R_Transcript_15187:2063-3412(+)
MEGLIKGLVDVAIGHDGRDDDDNNNNSQFHHNSASLEERSRSTWEEVVSGDQDNDDADRNRYDDGRRRNRPSRVGYGDGDADADQYSEFSESRPSSRPHHQPVHGNYSPDEDCERHAYSQNQTEVGEATDGWQTAGKKHHKQPQKIHMDHWNSYKRPPSEQEYSEELSHVAELEPSEAELADYKSACAKLWELDFNRLVPGKDYEINVGEGKRVHDRGDMADENLFTWVSEDVLRRPTFSRFCALLDNYNPNQGCKENVTANERQEQAAFIEEISRTAPIKYLYKYLSCNRIFTENYEEFKGMLTDLWFTLYGRGGTSGSSSSFEHVFVGEIKSRGEQEVSGFHNWLQFYLEEAKGNADYQGYILPRRRGEFPDSESQLLTVQFEWHGVLKNISSMFMGVSPEFELALYTLCFFAGGDDNHIEVGPYPVNIKCYRLANKIGSAFPMAEC*

Click here to download the sequence:
Link to NCBI Protein BLAST