Transcript Information: R_Transcript_15192.p1


Annotated TAIR IDAT2G18710.1
Annotated Gene NameSECY Homolog 1
Annotated Gene Symbol(s)SCY1
Annotation TypeOrtholog
Chromosome Positionchr2:8112231-8114452 | Reverse length=551
E-Value3.9E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8361174391794
Replicate 21.1711083897537
Replicate 31.9621309096306
Condition 2: 8 Hour
Replicate 11.8047350658328
Replicate 22.4053538235538
Replicate 33.0011627121357
Condition 3: 24 Hour
Replicate 11.829307348821
Replicate 22.0209998186585
Replicate 32.0056462462097


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15192.p1 GENE.R_Transcript_15192~~R_Transcript_15192.p1 ORF type:5prime_partial len:502 (+),score=54.37,SecY|PF00344.16|1.7e-76 R_Transcript_15192:2-1507(+)
CCCAACAAATGGGTTTGCAAGTCCACCCTTGGCTTTGGTGTTGCCTTCCGCAACAAACCCAAACCCAAACCCAAACCCATTTCTTGCAAAGCTGCTTCAGTCTCATCTACAAAGAGCTGCGAAAGTTCAGTGTTTGATCCCTTGGGTATCAATCCAGATGAATCATGGGGTCTAGCTAGTGCCTGGGATAGTGTACTGGGCTATTTTGCAGAGACTTTTGAGGGTGCCTCGGGTACGAGAAAAGACAGATCGGCGTCCGCTCGTGGAGTTGCAGCTGCAATTGAGGATAGTTCCATTGATTTCGGGGACTTCTTTAAGGGCCCATTACCGGGGAAATTTCTTAAACTGTTGGGCTATTTGGCCTCATCTCGGCTTGGGATATATGTGCCTCTTGGTGGCGTGAACCGTGAGGCCTTCGTAGGCAACTTGGATCAGAACAGTTTTATCAGCACTCTGGACTCCTTTTCTGGTGGTGGCATTGGACGACTTGGGATATGCTCGCTGGGAATCGTTCCCTTCATCAATGCCCAGATTGTATTTCAACTGCTTGCACAAGTCTACCCAAAGTTGCAGGACCTCCAGAAAAAAGAAGGTGAAGCAGGCAGGAAGAAGGTTCTGCAGTATACCCGCTATGCATCCGTTGGGTTTGCTTTAGTGCAGGCTATTGGGCAAGCTTTTTTCCTTCGTCCCTATGTCAACGACTTCAGTACCGAGTGGGTTGTTTCATCTGTTATACTGTTAACACTTGGTTCAGTATTTACAACCTACCTAGGGGAACGTATCTCTGACCTAAAACTTGGAAACGGTACATCACTACTAATCTTCACCAACATCATATCGTACTTGCCAGCGTCCTTTGGAAGGACAATTGCACAGGCATATCAAGAAGGGAATTACACCGGACTTGCCATCATAATAGCATCCTTTGTATCTTTGGTGTTTGGTATTGTTTACGTTCAGGAAGCAGAGAGGAAAATTCCACTGAATTATGCATCAAGATATTCTGGTAGAAGTGGGGGACTTCAAAAGTCTGCTTATTTACCCTTTAAGGTGAATAGTGCTGGGGTAATGCCTATCATATTCTCAACGTCATCATTCGCACTTCCGGGTACACTGGCTCGGTTTGCTGGTTTAGGCGTCCTGAAGAAAGCTGCAATCGCTTTGAATCCTGGAGGTTCTTTTTATCTTCCAACAAACATCCTATTAATAGCATTCTTCAACTATTACTACACATTCTTGCAACTGGATCCTGATGATGTGAGTGAACAACTGAAGCGTCAAGGTGCATCAATTCCTCTTGTGCGGCCTGGCAAAAGTTCTGAGTCGAATATCGGTCCTTGGTTCTGCTTTCCTGGCTATATTGGCAGCTGGTCCAGCTGTAGTCGAACAAGCTACTCATCTCACTGCATTTCGGGGGTTTGCAGGCACATCCGTGCTAATCCTTGTTGGTTGTGCTACAGATACCGCGAGAAAGGTTCAAGCCGAAATAATCTCCCAGAAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15192.p1 GENE.R_Transcript_15192~~R_Transcript_15192.p1 ORF type:5prime_partial len:502 (+),score=54.37,SecY|PF00344.16|1.7e-76 R_Transcript_15192:2-1507(+)
PNKWVCKSTLGFGVAFRNKPKPKPKPISCKAASVSSTKSCESSVFDPLGINPDESWGLASAWDSVLGYFAETFEGASGTRKDRSASARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGYLASSRLGIYVPLGGVNREAFVGNLDQNSFISTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKVLQYTRYASVGFALVQAIGQAFFLRPYVNDFSTEWVVSSVILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTIAQAYQEGNYTGLAIIIASFVSLVFGIVYVQEAERKIPLNYASRYSGRSGGLQKSAYLPFKVNSAGVMPIIFSTSSFALPGTLARFAGLGVLKKAAIALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSSESNIGPWFCFPGYIGSWSSCSRTSYSSHCISGVCRHIRANPCWLCYRYREKGSSRNNLPEV*

Click here to download the sequence:
Link to NCBI Protein BLAST