Transcript Information: R_Transcript_1520.p1


Annotated TAIR IDAT5G60030.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24172082-24172960 | Reverse length=292
E-Value8.5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.904418907522
Replicate 217.090011966754
Replicate 313.637499592128
Condition 2: 8 Hour
Replicate 114.235967992584
Replicate 214.560574222167
Replicate 310.722114180415
Condition 3: 24 Hour
Replicate 115.056050321425
Replicate 215.387389923659
Replicate 311.70737692555


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1520.p1 GENE.R_Transcript_1520~~R_Transcript_1520.p1 ORF type:complete len:215 (+),score=64.90 R_Transcript_1520:776-1420(+)
ATGAAGACCGTGTCGGGGACAGTTGTATCCCCGAAGCCGGTATCTCTTTCAAAAGCATCAAGAATTCTCTCGAAGTTTGTAGGTTCTGACAATTGTGCTTCCCCTTCATATCTTGCTTATTTGAGGCGTGCTTCAGAGTCGTTTGATGAGCTCGTTCAGGTCCACAAAGAGCTTAAAGGGACCAGAGGGTCCGAGCTCAAAGGTAAGAAGACGAAGCATAATGCTTCTTCTAGTGCTGTTTTGAATGAGGAGATTATTAGTCCTGTTGGTAAAAAAGAAGAATACGGTTTTTTAGCTGATGAGAGTAGTAGTAAGAGGGGTGAAAAAGAGAGCAAGAGGAGTGATGGAGTAGTAAATGGAAAAGTCGAGGAGAAAAAGAAGAAAAAAGGGAAAGATGAGAAGGATGGGGATCGAAACAAAAATGATGAAATTAGGTTTAGTGATAGTGTTAGTAACCAGGTTAAAAGTGAGCCAAATGAGGGTGGTGGTAAGGGGAAGAAGCATAAGAGGGAACAAAAACATCAAGTGGCCGAAGTAAAAGTTGAGATCAAGGAAGAAAATGTGAAAGAGAGTAGGAAGCGGAAGCATGATGATTCAGTGGAGAAGCACAAGTTGAAGAAATCGAAAAAAACTGCAGCAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1520.p1 GENE.R_Transcript_1520~~R_Transcript_1520.p1 ORF type:complete len:215 (+),score=64.90 R_Transcript_1520:776-1420(+)
MKTVSGTVVSPKPVSLSKASRILSKFVGSDNCASPSYLAYLRRASESFDELVQVHKELKGTRGSELKGKKTKHNASSSAVLNEEIISPVGKKEEYGFLADESSSKRGEKESKRSDGVVNGKVEEKKKKKGKDEKDGDRNKNDEIRFSDSVSNQVKSEPNEGGGKGKKHKREQKHQVAEVKVEIKEENVKESRKRKHDDSVEKHKLKKSKKTAAR*

Click here to download the sequence:
Link to NCBI Protein BLAST