Transcript Information: R_Transcript_152189.p1


Annotated TAIR IDAT2G05170.1
Annotated Gene Namevacuolar protein sorting 11
Annotated Gene Symbol(s)ATVPS11, VPS11
Annotation TypeOrtholog
Chromosome Positionchr2:1870020-1873278 | Forward length=932
E-Value1.7E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7822701744925
Replicate 28.1381009365496
Replicate 39.7664385099875
Condition 2: 8 Hour
Replicate 16.4536388233049
Replicate 27.8003076190182
Replicate 34.6434352749827
Condition 3: 24 Hour
Replicate 17.1186999155672
Replicate 25.6420429720082
Replicate 38.4836064677897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152189.p1 GENE.R_Transcript_152189~~R_Transcript_152189.p1 ORF type:complete len:129 (-),score=32.03,VPS11_C|PF12451.4|1.8e+03,VPS11_C|PF12451.4|6e-16,zf-C3H2C3|PF17122.1|5.8e-08 R_Transcript_152189:894-1280(-)
ATGTTTCTGCAGGAGGACACATCAGCAATGAGAAAAGAAATTGAGGATCTGCGGACAAATGCAAGAATCTTTCAGCTCAGCAAGTGCACTACATGCGCTTTCACCCTTGATCTTCCAGCAGTCCACTTTATGTGCATGCATTCATATCATCTACGATGTCTTGGTGACAATGAAAAGGAATGCCCTGAGTGTGCTCCTGATTACAGGTCCATCCTAGAAATGAAGAGAAATTTGGAGCAGAATTCTAGAGATCAGAATCAGTTCTTCCAGAAAGTGAAGAACTCAAAAGATGGATTTTCTGTGATCGCTGATTATTTTGGCAAGGGCATAATCAGCAAGACAAGACCTGACGGGGCTGGAAACAATGCCTCTGGCAGTGGAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152189.p1 GENE.R_Transcript_152189~~R_Transcript_152189.p1 ORF type:complete len:129 (-),score=32.03,VPS11_C|PF12451.4|1.8e+03,VPS11_C|PF12451.4|6e-16,zf-C3H2C3|PF17122.1|5.8e-08 R_Transcript_152189:894-1280(-)
MFLQEDTSAMRKEIEDLRTNARIFQLSKCTTCAFTLDLPAVHFMCMHSYHLRCLGDNEKECPECAPDYRSILEMKRNLEQNSRDQNQFFQKVKNSKDGFSVIADYFGKGIISKTRPDGAGNNASGSGI*

Click here to download the sequence:
Link to NCBI Protein BLAST