Transcript Information: R_Transcript_152248.p1


Annotated TAIR IDAT1G27850.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9699265-9703701 | Forward length=1148
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0281067727465
Replicate 20.53020960647217
Replicate 31.6196683148795
Condition 2: 8 Hour
Replicate 10.74199590749228
Replicate 21.2422712133992
Replicate 31.2834472155829
Condition 3: 24 Hour
Replicate 11.7392278202806
Replicate 21.0025117677535
Replicate 31.5476154829119


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152248.p1 GENE.R_Transcript_152248~~R_Transcript_152248.p1 ORF type:internal len:198 (+),score=43.95 R_Transcript_152248:3-593(+)
AGTTTCCAAGTTTGTGCTGTGCCAGTTGGTGCTTCCTCTGAGGCCATCAATGTGCAAGATGATTTGGTTGAAACTGGAAGCCATGAAAACACATTACACTGTTCTCGGTGTGGCTGCTGGTATCATGCTGGTGAGCCGACGGAAAGTGAACAAAACATATGTCCAAAATGCAAACAAAAAGGGGAGTATTTGACCAGTGGCGCGTCATTGATTGGGATCGATGCCACTGAGAATGCCTCAGCCCCTTTGTTGAACACCTTTGAGGAATCAAATGTGCTAGAGCCCATTCATACTTTTCCACAGTTGCATAATCCTGTGGGCATTGCTGAGCCAATTAACATATCACAGATCGCCCCACATGAAGAGAATAGACGTGAAGCCCAGGCCCAGGGTCATGGTACTCTGCATGTGCAAAGTTGCTCAGACAATTTTCTTACAGCGTCGGTGGGGGAAGAAAGCATACAGATGCTTTCCAAGCAGCAGATAATTGAAGAACAGAGAACTGTTCACAGTGCATCTGATGCTGCTAATGACTCGCCTCAGTTTCACAAATGTAGTGATAGATCGGATCCAAATATAGATGTAGCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152248.p1 GENE.R_Transcript_152248~~R_Transcript_152248.p1 ORF type:internal len:198 (+),score=43.95 R_Transcript_152248:3-593(+)
SFQVCAVPVGASSEAINVQDDLVETGSHENTLHCSRCGCWYHAGEPTESEQNICPKCKQKGEYLTSGASLIGIDATENASAPLLNTFEESNVLEPIHTFPQLHNPVGIAEPINISQIAPHEENRREAQAQGHGTLHVQSCSDNFLTASVGEESIQMLSKQQIIEEQRTVHSASDAANDSPQFHKCSDRSDPNIDVAE

Click here to download the sequence:
Link to NCBI Protein BLAST