Transcript Information: R_Transcript_152449.p1


Annotated TAIR IDAT4G32060.1
Annotated Gene Namecalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15501134-15503321 | Forward length=498
E-Value8E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6996684289819
Replicate 21.4450895023363
Replicate 31.3447275107053
Condition 2: 8 Hour
Replicate 11.4869958469987
Replicate 21.5842730049423
Replicate 31.6902309484571
Condition 3: 24 Hour
Replicate 11.8124584653451
Replicate 21.3840344647933
Replicate 31.4178270242525


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152449.p1 GENE.R_Transcript_152449~~R_Transcript_152449.p1 ORF type:complete len:494 (+),score=85.07,EF-hand_8|PF13833.2|1.3e+04,EF-hand_8|PF13833.2|0.0013,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|4.6e+02,EF-hand_8|PF13833.2|1.4e-13,EF-hand_1|PF00036.28|0.00016,EF-hand_1|PF00036.28|4e-07,EF-hand_1|PF00036.28|84,EF-hand_1|PF00036.28|2e+02,EF-hand_1|PF00036.28|1e+04,EF-hand_1|PF00036.28|0.00033,EF-hand_6|PF13405.2|0.012,EF-hand_6|PF13405.2|7.8e-07,EF-hand_6|PF13405.2|1.8e+02,EF-hand_6|PF13405.2|97,EF-hand_6|PF13405.2|1.9e+03,EF-hand_6|PF13405.2|8e+02,EF-hand_6|PF13405.2|0.0016,EF-hand_7|PF13499.2|0.019,EF-hand_7|PF13499.2|0.00015,EF-hand_7|PF13499.2|0.00053,EF-hand_5|PF13202.2|0.0015,EF-hand_5|PF13202.2|8.3e-06,EF-hand_5|PF13202.2|2.1e+03,EF-hand_5|PF13202.2|0.0005 R_Transcript_152449:566-2047(+)
ATGCATTCATCTTCACCATTGTTAAGAAAATCATCACCATTTATCCGTCGGACCATCCTCACACCTCATGGTGGGCCCCAGGTTCGGCTATTCGCCTGTGCACCTGAGCCTTCCATCTCATCATCATCGTTATCAGGTGGGTGTAAGGACAAAGGTACAAAGACAGGAAATTGGAATGCTGATAAAACAACCATCAATGTTGAACAATCTTCACATGTAATGAGATGGCTCTCTTCTGGGCTTTTCCTTGTTGGGTCGGGTTTGGGCCTGTGTTACTGGACCGCTACTCCGGCCTATGCAGATCAGCCCGCAGCAGCCGCTAGTGGGTTGTCGGATTTTGCGGAAGCTGCCCCTCAGAAGAAGCCTACCTTCTTGTTTAAAGATGAATATAGGAAGAGAGTCTTCTTTAACTATGAGAAGCGCATCAGACTGCGAAGCCCCCCTGAGAAGGTTTTCGAGTACTTTGCATCTATTCGATCTCCAAGCGGAGAAGCCTTCATGACACCAGGGGATTTGATGAGGGCAGTTGTTCCAGTTTTTCCTCCTTCAGAATCTAACTATGTCAGAGGTGGAAATTTGATGGGGGAGCGCCCTCCTGGAGAGTTGCAGTGTGCTCCTTCAGGGTTTTTCATGCTATTTGATACTAACAACGATGGCCTCATATCCTTTTCCGAGTACATCTTTTTGGTCACCCTTCTTAGTATTCCAGAATCAAGCTTTTCGGTGGCTTTCAAAATGTTCGACTTAGATCATAATGGAGAAATAGACAGGGAGGAATTTAAGAAGGTGATGTCTTTGATGCGAATGTACAACAGACAAGGGAGACAGCATAGTAATGGCCGGCGTTTTGGATTCAAAGTTGCTACTTCTGTTGAAAATGCTGGAGTAATTGAGTATTTCTTTGGTAAAGATGGAACAAATTTTCTTCGGCATGACAGATTTGTTCAGTTTTTAAGAGATTTGCATGATGAAATTTTAAGGTTGGAGTTTGCGCACTATGATCACAAGTCTCGGGGCACCATATCTGCTAGGGACTTTGCCTTGTCCATGGTGGCATCAGCTGACATGAGCCACACGACTAAGTTCCTTGATCGGGTTGATGAACTCAACAAAGATCCTCTTCTCAAGGACATACGTATCACGTATGATGAATTCAAAGACTATGCAGAACTCAGAAAGAGTTTACGTCCACTCTCTTTGGCAATCTTCAGCCATGGCAAAGCCAATGGACTCTTGACTAGGGTTGATTTCCAAAGGGCTGCTTCTCATGTATGTGGAATCTCTCTAACCAAGAATGTGGTCGACATAATATTTCACGTCTTTGATCTGAACTGCGATGGCAGTCTTAGCTCGGATGAATTCCTGAAGGTATTGCAAAGACGAGAAAGAGATGTTTCACTGCCTAGGGATCCTGGGATCAAGGGACTCCTCGCTTGCTGGATGGATTGCACTGCTAACTGCTCATCTGCGAAGATGGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152449.p1 GENE.R_Transcript_152449~~R_Transcript_152449.p1 ORF type:complete len:494 (+),score=85.07,EF-hand_8|PF13833.2|1.3e+04,EF-hand_8|PF13833.2|0.0013,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|4.6e+02,EF-hand_8|PF13833.2|1.4e-13,EF-hand_1|PF00036.28|0.00016,EF-hand_1|PF00036.28|4e-07,EF-hand_1|PF00036.28|84,EF-hand_1|PF00036.28|2e+02,EF-hand_1|PF00036.28|1e+04,EF-hand_1|PF00036.28|0.00033,EF-hand_6|PF13405.2|0.012,EF-hand_6|PF13405.2|7.8e-07,EF-hand_6|PF13405.2|1.8e+02,EF-hand_6|PF13405.2|97,EF-hand_6|PF13405.2|1.9e+03,EF-hand_6|PF13405.2|8e+02,EF-hand_6|PF13405.2|0.0016,EF-hand_7|PF13499.2|0.019,EF-hand_7|PF13499.2|0.00015,EF-hand_7|PF13499.2|0.00053,EF-hand_5|PF13202.2|0.0015,EF-hand_5|PF13202.2|8.3e-06,EF-hand_5|PF13202.2|2.1e+03,EF-hand_5|PF13202.2|0.0005 R_Transcript_152449:566-2047(+)
MHSSSPLLRKSSPFIRRTILTPHGGPQVRLFACAPEPSISSSSLSGGCKDKGTKTGNWNADKTTINVEQSSHVMRWLSSGLFLVGSGLGLCYWTATPAYADQPAAAASGLSDFAEAAPQKKPTFLFKDEYRKRVFFNYEKRIRLRSPPEKVFEYFASIRSPSGEAFMTPGDLMRAVVPVFPPSESNYVRGGNLMGERPPGELQCAPSGFFMLFDTNNDGLISFSEYIFLVTLLSIPESSFSVAFKMFDLDHNGEIDREEFKKVMSLMRMYNRQGRQHSNGRRFGFKVATSVENAGVIEYFFGKDGTNFLRHDRFVQFLRDLHDEILRLEFAHYDHKSRGTISARDFALSMVASADMSHTTKFLDRVDELNKDPLLKDIRITYDEFKDYAELRKSLRPLSLAIFSHGKANGLLTRVDFQRAASHVCGISLTKNVVDIIFHVFDLNCDGSLSSDEFLKVLQRRERDVSLPRDPGIKGLLACWMDCTANCSSAKMG*

Click here to download the sequence:
Link to NCBI Protein BLAST