Transcript Information: R_Transcript_152450.p1


Annotated TAIR IDAT4G32060.1
Annotated Gene Namecalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15501134-15503321 | Forward length=498
E-Value1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10460149544251
Replicate 20.18048395773322
Replicate 30.59071816150536
Condition 2: 8 Hour
Replicate 10.35080035741039
Replicate 20.12814258934777
Replicate 30.52010345617155
Condition 3: 24 Hour
Replicate 10.52625346080697
Replicate 20
Replicate 30.2508619448355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152450.p1 GENE.R_Transcript_152450~~R_Transcript_152450.p1 ORF type:complete len:349 (+),score=59.31,EF-hand_1|PF00036.28|0.00011,EF-hand_1|PF00036.28|2.6e-07,EF-hand_6|PF13405.2|0.0077,EF-hand_6|PF13405.2|5e-07,EF-hand_6|PF13405.2|1e+02,EF-hand_5|PF13202.2|0.001,EF-hand_5|PF13202.2|5.4e-06,EF-hand_7|PF13499.2|0.011,EF-hand_7|PF13499.2|0.00019,EF-hand_8|PF13833.2|6.7e+03,EF-hand_8|PF13833.2|0.00086,EF-hand_8|PF13833.2|0.016 R_Transcript_152450:564-1610(+)
ATGCATTCATCTTCACCATTGTTAAGAAAATCATCACCATTTATCCGTCGGACCATCCTCACACCTCATGGTGGGCCCCAGGTTCGGCTATTCGCCTGTGCACCTGAGCCTTCCATCTCATCATCATCGTTATCAGGTGGGTGTAAGGACAAAGGTACAAAGACAGGAAATTGGAATGCTGATAAAACAACCATCAATGTTGAACAATCTTCACATGTAATGAGATGGCTCTCTTCTGGGCTTTTCCTTGTTGGGTCGGGTTTGGGCCTGTGTTACTGGACCGCTACTCCGGCCTATGCAGATCAGCCCGCAGCAGCCGCTAGTGGGTTGTCGGATTTTGCGGAAGCTGCCCCTCAGAAGAAGCCTACCTTCTTGTTTAAAGATGAATATAGGAAGAGAGTCTTCTTTAACTATGAGAAGCGCATCAGACTGCGAAGCCCCCCTGAGAAGGTTTTCGAGTACTTTGCATCTATTCGATCTCCAAGCGGAGAAGCCTTCATGACACCAGGGGATTTGATGAGGGCAGTTGTTCCAGTTTTTCCTCCTTCAGAATCTAACTATGTCAGAGGTGGAAATTTGATGGGGGAGCGCCCTCCTGGAGAGTTGCAGTGTGCTCCTTCAGGGTTTTTCATGCTATTTGATACTAACAACGATGGCCTCATATCCTTTTCCGAGTACATCTTTTTGGTCACCCTTCTTAGTATTCCAGAATCAAGCTTTTCGGTGGCTTTCAAAATGTTCGACTTAGATCATAATGGAGAAATAGACAGGGAGGAATTTAAGAAGGTGATGTCTTTGATGCGAATGTACAACAGACAAGGGAGACAGCATAGTAATGGCCGGCGTTTTGGATTCAAAGTTGCTACTTCTGTTGAAAATGCTGGAGTAATTGAGTATTTCTTTGGTAAAGATGGAACAAATTTTCTTCGGCATGACAGATTTGTTCAGTTTTTAAGAGATTTGCATGATGAAGTATGTGGGACTCTCTCCCCATCTCACATTTCAGGCTTAAAAATCTTTACTCCTGTACATCTTAGATTGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152450.p1 GENE.R_Transcript_152450~~R_Transcript_152450.p1 ORF type:complete len:349 (+),score=59.31,EF-hand_1|PF00036.28|0.00011,EF-hand_1|PF00036.28|2.6e-07,EF-hand_6|PF13405.2|0.0077,EF-hand_6|PF13405.2|5e-07,EF-hand_6|PF13405.2|1e+02,EF-hand_5|PF13202.2|0.001,EF-hand_5|PF13202.2|5.4e-06,EF-hand_7|PF13499.2|0.011,EF-hand_7|PF13499.2|0.00019,EF-hand_8|PF13833.2|6.7e+03,EF-hand_8|PF13833.2|0.00086,EF-hand_8|PF13833.2|0.016 R_Transcript_152450:564-1610(+)
MHSSSPLLRKSSPFIRRTILTPHGGPQVRLFACAPEPSISSSSLSGGCKDKGTKTGNWNADKTTINVEQSSHVMRWLSSGLFLVGSGLGLCYWTATPAYADQPAAAASGLSDFAEAAPQKKPTFLFKDEYRKRVFFNYEKRIRLRSPPEKVFEYFASIRSPSGEAFMTPGDLMRAVVPVFPPSESNYVRGGNLMGERPPGELQCAPSGFFMLFDTNNDGLISFSEYIFLVTLLSIPESSFSVAFKMFDLDHNGEIDREEFKKVMSLMRMYNRQGRQHSNGRRFGFKVATSVENAGVIEYFFGKDGTNFLRHDRFVQFLRDLHDEVCGTLSPSHISGLKIFTPVHLRLN*

Click here to download the sequence:
Link to NCBI Protein BLAST