Transcript Information: R_Transcript_152468.p1


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value1.2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2548910656369
Replicate 20.52490751040745
Replicate 30.71583554987976
Condition 2: 8 Hour
Replicate 10.30607331184057
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.2869725903463
Replicate 20
Replicate 30.13679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152468.p1 GENE.R_Transcript_152468~~R_Transcript_152468.p1 ORF type:complete len:160 (+),score=27.69,Pep_deformylase|PF01327.17|4.9e-06 R_Transcript_152468:46-525(+)
ATGAACATAAATAGCGGCTCTCAAAATGTCAAAGCCATTGCAAAACCAAAGAGCTCGCCCCCCACAGAAAGGATGTCAAGCACCACCACATTTGGTTCAGCAACGAGGCTCTATCATCGACTCATATGGACAACAGCAAAACAACCCCACCTTCTTTCATTTCCTTTAAATACCAATTTCCTTCCTCTCTTTAACTCTAAACCCATCAAATTTCACTCCACTTTCTCCCCTAACAAGGTCCAAGTTATGGCCAAACAAAGTCCTTCTTCTTCTTTCAAAGATGATATCCCTGCCTCAAGTTCTGACTTGCAATTTGAGCCACCTTTAAAGATTGTGGAGTACCCGGATCCCAGGCTTAGAGCCAAGAACAAGAGGATTGATACTTTTGATGATAACTTGAAGAAGTTGGTTGAGGCAATGTTTGATATCATGTACAAGATTGTGAACAATACTTGTTGGCTTCCTTTTCCACAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152468.p1 GENE.R_Transcript_152468~~R_Transcript_152468.p1 ORF type:complete len:160 (+),score=27.69,Pep_deformylase|PF01327.17|4.9e-06 R_Transcript_152468:46-525(+)
MNINSGSQNVKAIAKPKSSPPTERMSSTTTFGSATRLYHRLIWTTAKQPHLLSFPLNTNFLPLFNSKPIKFHSTFSPNKVQVMAKQSPSSSFKDDIPASSSDLQFEPPLKIVEYPDPRLRAKNKRIDTFDDNLKKLVEAMFDIMYKIVNNTCWLPFPQN*

Click here to download the sequence:
Link to NCBI Protein BLAST