Transcript Information: R_Transcript_152470.p1


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value2.4E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.278366362851
Replicate 28.4256998434335
Replicate 311.193907368994
Condition 2: 8 Hour
Replicate 18.2411972637977
Replicate 210.131143876265
Replicate 310.280038377242
Condition 3: 24 Hour
Replicate 19.1385446246201
Replicate 28.2082678718977
Replicate 310.483431371071


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152470.p1 GENE.R_Transcript_152470~~R_Transcript_152470.p1 ORF type:complete len:309 (+),score=66.48,Pep_deformylase|PF01327.17|3.3e-50 R_Transcript_152470:46-972(+)
ATGAACATAAATAGCGGCTCTCAAAATGTCAAAGCCATTGCAAAACCAAAGAGCTCGCCCCCCACAGAAAGGATGTCAAGCACCACCACATTTGGTTCAGCAACGAGGCTCTATCATCGACTCATATGGACAACAGCAAAACAACCCCACCTTCTTTCATTTCCTTTAAATACCAATTTCCTTCCTCTCTTTAACTCTAAACCCATCAAATTTCACTCCACTTTCTCCCCTAACAAGGTCCAAGTTATGGCCAAACAAAGTCCTTCTTCTTCTTTCAAAGATGATATCCCTGCCTCAAGTTCTGACTTGCAATTTGAGCCACCTTTAAAGATTGTGGAGTACCCGGATCCCAGGCTTAGAGCCAAGAACAAGAGGATTGATACTTTTGATGATAACTTGAAGAAGTTGGTTGAGGCAATGTTTGATATCATGTACAAAACTGATGGAATTGGGCTTGCAGCTCCCCAAGTAGGCATTAATGTCCAGCTCATGGTCTTTAATCCTGTTGGTGAACCTGAAGAGGGGAATGAAATTGTTCTTATAAATCCCAGAGTTAGCAGGTCCTCACAAAAGATGAAAGTTTTCGAAGAAGGGTGTTTGTCATTTCCTAAAATATATGGTGATGTTCAGAGACCAGAATCCATTAAGATTGATGCCAATGACCTCACAGGTAAAAGGTTCTCAGTTACGTTGTCAGGCCTTCCTGCACGGGTGTTCCAGCATGAATTTGACCATTTGCAGGGCGTCCTTTTCTTTGAGAGAATGACAGATGAAGTTCTTGACAGTATCCGTGCAGATTTACAGGCATTAGAGGATAAGTATGAGAAGGTTACAGGACTCCCGAGCCCTGAAAACATAAAAAATCAGATGGGAAGGAAAACACCTGTTGGATTTGGGAAATCACCAGTTGGTTTTGGGAAGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152470.p1 GENE.R_Transcript_152470~~R_Transcript_152470.p1 ORF type:complete len:309 (+),score=66.48,Pep_deformylase|PF01327.17|3.3e-50 R_Transcript_152470:46-972(+)
MNINSGSQNVKAIAKPKSSPPTERMSSTTTFGSATRLYHRLIWTTAKQPHLLSFPLNTNFLPLFNSKPIKFHSTFSPNKVQVMAKQSPSSSFKDDIPASSSDLQFEPPLKIVEYPDPRLRAKNKRIDTFDDNLKKLVEAMFDIMYKTDGIGLAAPQVGINVQLMVFNPVGEPEEGNEIVLINPRVSRSSQKMKVFEEGCLSFPKIYGDVQRPESIKIDANDLTGKRFSVTLSGLPARVFQHEFDHLQGVLFFERMTDEVLDSIRADLQALEDKYEKVTGLPSPENIKNQMGRKTPVGFGKSPVGFGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST