Transcript Information: R_Transcript_152475.p1


Annotated TAIR IDAT5G14660.1
Annotated Gene Namepeptide deformylase 1B
Annotated Gene Symbol(s)PDF1B, DEF2, ATDEF2
Annotation TypeOrtholog
Chromosome Positionchr5:4727129-4728671 | Reverse length=273
E-Value6.9E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6259821540123
Replicate 20.78434455578125
Replicate 31.3823031308023
Condition 2: 8 Hour
Replicate 10.91470185147755
Replicate 21.4136189669715
Replicate 31.5647940189989
Condition 3: 24 Hour
Replicate 11.1874727876399
Replicate 20.57039462648045
Replicate 31.886871093698


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152475.p1 GENE.R_Transcript_152475~~R_Transcript_152475.p1 ORF type:complete len:348 (+),score=48.90,Pep_deformylase|PF01327.17|9.9e-46 R_Transcript_152475:46-1089(+)
ATGAACATAAATAGCGGCTCTCAAAATGTCAAAGCCATTGCAAAACCAAAGAGCTCGCCCCCCACAGAAAGGATGTCAAGCACCACCACATTTGGTTCAGCAACGAGGCTCTATCATCGACTCATATGGACAACAGCAAAACAACCCCACCTTCTTTCATTTCCTTTAAATACCAATTTCCTTCCTCTCTTTAACTCTAAACCCATCAAATTTCACTCCACTTTCTCCCCTAACAAGGTCCAAGTTATGGCCAAACAAAGTCCTTCTTCTTCTTTCAAAGATGATATCCCTGCCTCAAGTTCTGACTTGCAATTTGAGCCACCTTTAAAGATTGTGGAGTACCCGGATCCCAGGCTTAGAGCCAAGAACAAGAGGATTGATACTTTTGATGATAACTTGAAGAAGTTGGTTGAGGCAATGTTTGATATCATGTACAAAACTGATGGAATTGGGCTTGCAGCTCCCCAAGTAGGCATTAATGTCCAGCTCATGGTCTTTAATCCTGTTGGTGAACCTGAAGAGGGGAATGAAATTGTTCTTATAAATCCCAGAGTTAGCAGGTCCTCACAAAAGATGAAAGTTTTCGAAGAAGGGTGTTTGTCATTTCCTAAAATATATGGTGATGTTCAGAGACCAGAATCCATTAAGATTGATGCCAATGACCTCACAGGTAAAAGGTTCTCAGTTACGTTGTCAGGCCTTCCTGCACGGGTGTTCCAGCATGAATTTGACCATTTACAGAGCAGATCTTATGAGTTCCTTCAGAACCTTCTTTCTCCTGTCATGCAAATTTATTGCAGTAATGCTCATACATTCATTCTTTCTACAAAATCCTCTCAAGCTATCAGATGGTCCTGGTTTTATATGGTCCACTATATTTGTATGAAGCAAAATTTTTGGAACAGTGCTGTAATCTACTGTCTGCTATCCTTGCTGCTGCTACTAGCTATTTTAGGCGACTTATTGGTGAATGCTTGGTTTACCCAAACAACGAGTAGTCACTCCGTATCTTGTGTTAAATTTGCTAGTCCCTTTTTGTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152475.p1 GENE.R_Transcript_152475~~R_Transcript_152475.p1 ORF type:complete len:348 (+),score=48.90,Pep_deformylase|PF01327.17|9.9e-46 R_Transcript_152475:46-1089(+)
MNINSGSQNVKAIAKPKSSPPTERMSSTTTFGSATRLYHRLIWTTAKQPHLLSFPLNTNFLPLFNSKPIKFHSTFSPNKVQVMAKQSPSSSFKDDIPASSSDLQFEPPLKIVEYPDPRLRAKNKRIDTFDDNLKKLVEAMFDIMYKTDGIGLAAPQVGINVQLMVFNPVGEPEEGNEIVLINPRVSRSSQKMKVFEEGCLSFPKIYGDVQRPESIKIDANDLTGKRFSVTLSGLPARVFQHEFDHLQSRSYEFLQNLLSPVMQIYCSNAHTFILSTKSSQAIRWSWFYMVHYICMKQNFWNSAVIYCLLSLLLLLAILGDLLVNAWFTQTTSSHSVSCVKFASPFLC*

Click here to download the sequence:
Link to NCBI Protein BLAST