Transcript Information: R_Transcript_152542.p1


Annotated TAIR IDAT3G24340.1
Annotated Gene Namechromatin remodeling 40
Annotated Gene Symbol(s)chr40
Annotation TypeHomolog
Chromosome Positionchr3:8832085-8835722 | Reverse length=1132
E-Value2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90023106749463
Replicate 20.24995595733688
Replicate 30.27269925709705
Condition 2: 8 Hour
Replicate 10.58299678445822
Replicate 20.79860292289948
Replicate 31.3891538740092
Condition 3: 24 Hour
Replicate 10.78087779686068
Replicate 20.60014309906333
Replicate 30.89337570150601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152542.p1 GENE.R_Transcript_152542~~R_Transcript_152542.p1 ORF type:5prime_partial len:588 (+),score=180.02,SNF2_N|PF00176.19|9.9e-06 R_Transcript_152542:1-1764(+)
GCACGTTGGAACCCTTTCGACTTATATGATGATGTTGGTGATGATGATGATGATGACAGTAATGGGCCTGGTTCCTTGGCCTTGCGGTTGTTTGGGTTGGGTCCTGAAGGTGAGAAGCTTGTTTGTGCTGATCCTAGTTCTAGGGTCGAGAACAATGTAGGTGGGGCTCTTGTAAGGGTTGAGTCCGAGTCCGAGTCCCAATCTGAGTCTTCTAATGCTTCATCAAGCTCGAGCGCCGAGCTTGATGCTTCTGATGATGACAGTGGCTCTGATTATGTTGATGTTGATGATGATGATTTTGGTGTTTGTTGTGATCATGGTGGTAACGGTGAGAAGGGGCATGGGAAAATAACAAGGAAAAGAAGAGGTTTTGAGAGTGAGAAGAGGAATTTTGATGGGTTGGTTTTGTATGCTTACCCTGAGCTTGGTGATAATGAGATGAGAAAAAGAACAAGGTCTCATTTCAATGTCCCTAAGAGGAAAACAAAGGATGGGACCTTTCGACGTCCCATTGATGTGGAGGAGGATGTGGAGGAGATAAATTTGTCTGATGATGGTGAATGTGGTGATGCTGCTATCCATGTGAGAGATCCTCGTCCTCCTCCTCCTCCTCATTCTAAGTTTCATAATTCAGGTAGCAATGGAGGGATTCGACAAAGAGGGAGGCCACGTAAGACTAAAGACGATGATTTGGAGTCCCCGCTTAGGAGGAAGAGAGTGAAGGGGCTTAATAACAGTGACCTTCAAAAGGTTCTTCTCAATACAATGTTGGAGGGTGAAGAAGCAGGTTTAGAGGATTTGGTGTCATCCTCTATCAGTGAATTGTATCTGCCCTTGAAGTTTACTTTTGGAGTGGAGAAGTTGAATCCTGAAGTTAAGTCAGCTGAGGATCAGGAGTCAGAGAAACTTTGGAAGGAGCTTGAGTTCTGTCGTGGAGCTTGCCATATTGGCAGTGACAATTTCTGTTTGGAGGATCAGGAAGATCTCGAGCCTTCAGATAGCGCAATATCACAACAGAAGCTTTGTGCTCAAGGGAAACATTATCTGATCGATGACGATGAAATTGGGATCATTTGCAAATTCTGCTCATTTGTGGCTATAGAGATAAAAGATGTCACCCCGGAATTTAACAAGGATCCATTTGGGAGGTCAGAGAACAGAGGCTATGGGAGGTTTCCATATGATGATCTCATCTCCAATGGGGTTCAGTTTCTTGATCCAGGCTATGAATCCCTAGCTGGTAGTAGCCCTTGGGATGAAACTCCAGGCACAGTATGGGACCTCATCCCTGGGGTCAAGAGGACTTTATACCCTCATCAACAAGAAGGTTTTGAGTTCATTTGGAGGAACATCTGTGGAGGAATAAAAATCGAGGAACTCTGTAAGCCTTCTAAGTCCGGACTAGGAGGATGCATCATCTGCCATGCCCCAGGGACTGGGAAGACTCGTCTGGCAATTGTCTTCCTTAAATCATACATGAAGCAATTCCCAGCATCGAAGCCAGTAATCATAGCTCCAGCTAGCATGCTCCTTACTTGGGAAGAGCAGTTTGCCAAGTGGGGCCCTGACATTCCGTTCTTCAACATGAATGGGAAAGATCTATCTAGTGAGGAACTTAAAGTTCTTGGTGCATTGAAGAGTGGTCAAAGTTTAGACCCAAAAACCATTCGTGTTGCTAAGCTATGCAATTGGAAGATGGGAAAGGGTGTGTTAGGTATTAGCTACACCCTTTTCGAGCAGCTTGCTGGGGATAGAGAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152542.p1 GENE.R_Transcript_152542~~R_Transcript_152542.p1 ORF type:5prime_partial len:588 (+),score=180.02,SNF2_N|PF00176.19|9.9e-06 R_Transcript_152542:1-1764(+)
ARWNPFDLYDDVGDDDDDDSNGPGSLALRLFGLGPEGEKLVCADPSSRVENNVGGALVRVESESESQSESSNASSSSSAELDASDDDSGSDYVDVDDDDFGVCCDHGGNGEKGHGKITRKRRGFESEKRNFDGLVLYAYPELGDNEMRKRTRSHFNVPKRKTKDGTFRRPIDVEEDVEEINLSDDGECGDAAIHVRDPRPPPPPHSKFHNSGSNGGIRQRGRPRKTKDDDLESPLRRKRVKGLNNSDLQKVLLNTMLEGEEAGLEDLVSSSISELYLPLKFTFGVEKLNPEVKSAEDQESEKLWKELEFCRGACHIGSDNFCLEDQEDLEPSDSAISQQKLCAQGKHYLIDDDEIGIICKFCSFVAIEIKDVTPEFNKDPFGRSENRGYGRFPYDDLISNGVQFLDPGYESLAGSSPWDETPGTVWDLIPGVKRTLYPHQQEGFEFIWRNICGGIKIEELCKPSKSGLGGCIICHAPGTGKTRLAIVFLKSYMKQFPASKPVIIAPASMLLTWEEQFAKWGPDIPFFNMNGKDLSSEELKVLGALKSGQSLDPKTIRVAKLCNWKMGKGVLGISYTLFEQLAGDREE*

Click here to download the sequence:
Link to NCBI Protein BLAST