Transcript Information: R_Transcript_15269.p1


Annotated TAIR IDAT3G24520.1
Annotated Gene Nameheat shock transcription factor C1
Annotated Gene Symbol(s)AT-HSFC1, HSFC1
Annotation TypeOrtholog
Chromosome Positionchr3:8941455-8942531 | Forward length=330
E-Value1.9E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7982966821146
Replicate 25.1419511223587
Replicate 35.2591999583003
Condition 2: 8 Hour
Replicate 117.92715112209
Replicate 230.460997202023
Replicate 324.68063382823
Condition 3: 24 Hour
Replicate 112.298825300556
Replicate 210.971366029752
Replicate 312.563095802428


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15269.p1 GENE.R_Transcript_15269~~R_Transcript_15269.p1 ORF type:5prime_partial len:392 (+),score=29.76,HSF_DNA-bind|PF00447.13|3.4e-33 R_Transcript_15269:2-1177(+)
AATATCATCTTCTCTCCTTTATATACTCCTATAAATATAAATTATTCCTCCTGTGATTACATTAGCTCCCTTCTTCTCCATCCACACAACGAGCGAGCTGAGATAGAACAGAATACCAACTTAACCTTAAGCAAAAATTATAAGGTAGGAATCGTATGCGAAAGGGAGCAGATGGAGCAAGGTGGGAACAGCACGAATATAATAGCGCCGTTTGTGATGAAAACTTATCAGATGGTGAGCGACCCTTCTACTGATCATCTCATCCGTTGGGGACGAGCTTATAACAGTTTTATTGTGGTCGACCCTTTAGACTTCTCTCAGCGTATCCTTCCCTCCTTTTTCAAGCATAACAATTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATAGATTTCGGAAGGTGGACCCTGACAAATGGGAATTTGCCAACGAGTGGTTCCTACGAGGCCAAAAACAACTCCTCCCAAACATCACTCGTCGCAAACACATGACCAAACCCAATCACCTTCAAGATTACGACGATCAAGAATTACTAGCCGAGATCGAACGGCTCAGAGACGACCAAAAATCCTTGGAACAACAACTCAAGGGTATGAATCGACGGCTAGAAGCCACCGAGAAACGCCCTCAACAAATGATGGCCTTTCTTTGCAAAATTGTTGAGGACCCTGAGATTCTGCCACGTGTCATGATCGAAAGAGACCGTTTTAGTCAGCTCCAACTGTCCTCTCCTGACAAACGACGCCGTTTACTCATGCTGTCATCCTCCTCGTCATCTTCCGGTGTTGCTGCTCAGTCTAATAACAGTACTGATCTCGACGATGAGGGGACCACCTTAGGGGTAATTTCGTCTTCTGTGTGTAATAATAATGGTACTAATTTTGAGGTTGATGCTTTTCCTGATCAGTCCACGTCTTCGCCGGACACGTGTCATAGCCCTGGGTTGCTTTCCCCGGCTGGGCCGGATAATACTGGTCTTGGGCTTCACTATACTAACTGGGCCCATGCTGTCTCTGGGCCATTGCCTTCGGCCTCGATACCGGGTCCTGACTCATCATCTCAAATGGGTCCTACAGGTGATGGTAATGTACATGCTGTCGACCATATTCCTGATTCCATGCGTGAGATGGAGAATACACCGCCATATCCTTTTTCACTCTTAGACGGTGGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15269.p1 GENE.R_Transcript_15269~~R_Transcript_15269.p1 ORF type:5prime_partial len:392 (+),score=29.76,HSF_DNA-bind|PF00447.13|3.4e-33 R_Transcript_15269:2-1177(+)
NIIFSPLYTPININYSSCDYISSLLLHPHNERAEIEQNTNLTLSKNYKVGIVCEREQMEQGGNSTNIIAPFVMKTYQMVSDPSTDHLIRWGRAYNSFIVVDPLDFSQRILPSFFKHNNFSSFVRQLNTYRFRKVDPDKWEFANEWFLRGQKQLLPNITRRKHMTKPNHLQDYDDQELLAEIERLRDDQKSLEQQLKGMNRRLEATEKRPQQMMAFLCKIVEDPEILPRVMIERDRFSQLQLSSPDKRRRLLMLSSSSSSSGVAAQSNNSTDLDDEGTTLGVISSSVCNNNGTNFEVDAFPDQSTSSPDTCHSPGLLSPAGPDNTGLGLHYTNWAHAVSGPLPSASIPGPDSSSQMGPTGDGNVHAVDHIPDSMREMENTPPYPFSLLDGGF*

Click here to download the sequence:
Link to NCBI Protein BLAST