Transcript Information: R_Transcript_152847.p1


Annotated TAIR IDAT1G32120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11552926-11558608 | Forward length=1206
E-Value8E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60524652380394
Replicate 20.43971309772352
Replicate 30.15990741777419
Condition 2: 8 Hour
Replicate 10.47006023458935
Replicate 20.23414535959357
Replicate 30.57020766346765
Condition 3: 24 Hour
Replicate 10.12019794360055
Replicate 20.23094511927306
Replicate 30.42018281248843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152847.p1 GENE.R_Transcript_152847~~R_Transcript_152847.p1 ORF type:3prime_partial len:573 (+),score=101.89,PMD|PF10536.5|7e-82 R_Transcript_152847:44-1717(+)
ATGTATTCCAATTCAAATCCGACCCACAAAGAAACTTGTCCCCAAATCATTTCCCCTGAAAATGAGAAACCCACAAAAACAATCACAAAATCTTATGGGCAATCCTCTCCTGTCAAAAACCCTTCTTTATTGTGTAACATATTCTCAGAAAAAAAATACCATCTTGAATGGCCATTTAAGGTGAATTTTCCAGGCTGGAAAAAACCCCCTAATGATTGGGTCAATTGGGTTGAGCATGTTTCAGCCAAACATGCCAAAGTTTGGGTACAAACAGGTATTTGTGATGGTATTCTTTCATCCTTGAATGAAATTAAATTTAACCCAGAAATTGTTCTAGCTTTAACTGAATTTTGGTGTCCAAAGACGAATACTTTTATGTTTCCATGGGGTGAATCCACCATTACTCTTGAGGATGTCATGATTTTAGCCGGGTTGCCGGTTTTCGGGCAATCAGTAAACATACCCATTTCAGATGTTTCAGTGAAAGTTCTAGAAGAAAAGTTGGTTAAGGTGAGAAGTTATGTGTCGAAAAATAGAGCTGCTAAAAAAGCATCTTATTCATGTTGGATTAAGTACTTTAATGAAGAGTTAAAAGGGGAGAATAAATCATCATTAGAGCATGTTGGGTTTTTGGCATATTGGCTTTCAAGGTTTGTATTTCCAGACCTTGATCAAAGAACAATAGGTAAACATGTGTTTTCAATAGCGGTTATGTTATCTCAAGGGGTTAGGATTGCTCTTGCCCCTGCTGTTCTGTCCTGTATGTATCAGAATCTGACATTTTTGAGTCAACATATTGCTGATTGTGATACCAATAAGAAAGAAATTTCTGTGCCTGGCCCCTTTCAGATTGTTTGTGTTTGGGCTTTAGAGAGGTTCCCCTTGTTGGGGTCGATGTTATCGAAGCCCTTAAGTTTAGGACAGCCAAGGATTGCCAGATGGGATAAGGTGGGTTTCAGTATGAGTTTGCCGGATGTTAGATCAGTTTTAAGGTCAGAAGGTAGTTTTGTATGGCGCCCTTATGCTTTAGACTTGGAGAATTGGCGCGTTCCATCATTTTATCGTCTGATTGAGCTGAAAGTGTCTGACCGCTCAGCTCTCGATGATGATCATGAGGAACTGATGTCGTTCTGTGCATGTTTGCGTCCTCAGGAGCTGGTTGGTATTGATTGCAATGAAATGTATCGACCTCAGAGGGTAGGTATGCAATTTGGTTATGATAAGGAATTCCAAGGAGAAATTGAGTTTTCGAGTACTTCAGTGTCAGGAATTGTTAGGATGATTGTGGCTTCGAGATCATTGGAGTCAGGTAAGCCTCAGGAGAACAGCAAATGCTCGAAAGAATCTAAATGCGATGATAGTGATAAGATTGAAGCAGAAGGGATGAAGAAACCAAACAATGATGAGACAAAGCCAATGCTGGAAACTGATGTTGTGAAATCAGAACTCGATACTGGTGGTGGATGCCTGCAAAATGTGCTAGTTAGTTGTATTCCTCCGAGTGATGTTTTTGATGCTTTGAGTGATAATAATGGTAGGAAAAGAAAACTTTGCACGGGGAGACAAAAATGGAGTAGGCATGACATTATCAGTTTGGATTTAGATGAGGAGGAAGTTGAGATTATAGGGCAAAAGGGTGATGGTCATCCAAGCAGTAGAACTGCAAAGGAGGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152847.p1 GENE.R_Transcript_152847~~R_Transcript_152847.p1 ORF type:3prime_partial len:573 (+),score=101.89,PMD|PF10536.5|7e-82 R_Transcript_152847:44-1717(+)
MYSNSNPTHKETCPQIISPENEKPTKTITKSYGQSSPVKNPSLLCNIFSEKKYHLEWPFKVNFPGWKKPPNDWVNWVEHVSAKHAKVWVQTGICDGILSSLNEIKFNPEIVLALTEFWCPKTNTFMFPWGESTITLEDVMILAGLPVFGQSVNIPISDVSVKVLEEKLVKVRSYVSKNRAAKKASYSCWIKYFNEELKGENKSSLEHVGFLAYWLSRFVFPDLDQRTIGKHVFSIAVMLSQGVRIALAPAVLSCMYQNLTFLSQHIADCDTNKKEISVPGPFQIVCVWALERFPLLGSMLSKPLSLGQPRIARWDKVGFSMSLPDVRSVLRSEGSFVWRPYALDLENWRVPSFYRLIELKVSDRSALDDDHEELMSFCACLRPQELVGIDCNEMYRPQRVGMQFGYDKEFQGEIEFSSTSVSGIVRMIVASRSLESGKPQENSKCSKESKCDDSDKIEAEGMKKPNNDETKPMLETDVVKSELDTGGGCLQNVLVSCIPPSDVFDALSDNNGRKRKLCTGRQKWSRHDIISLDLDEEEVEIIGQKGDGHPSSRTAKEV

Click here to download the sequence:
Link to NCBI Protein BLAST