Transcript Information: R_Transcript_152854.p1


Annotated TAIR IDAT3G11460.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3608250-3610121 | Forward length=623
E-Value2.8E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.080056861226
Replicate 20.6833115520097
Replicate 30.71159983656687
Condition 2: 8 Hour
Replicate 11.0142074238504
Replicate 20.7277210066658
Replicate 31.127762790024
Condition 3: 24 Hour
Replicate 11.1886438653397
Replicate 20.71777469762234
Replicate 31.4246435003306


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_152854.p1 GENE.R_Transcript_152854~~R_Transcript_152854.p1 ORF type:complete len:676 (+),score=107.72,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|0.073,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|1.1e+04,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.061,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|0.052,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|4.7,PPR|PF01535.16|0.084,PPR|PF01535.16|69,PPR|PF01535.16|2.3e+03,DYW_deaminase|PF14432.2|2.1e-27,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|3.5e+02,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|5.4e+02,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.00056,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|92,PPR_3|PF13812.2|65,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.085,PPR_3|PF13812.2|9.7,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|4.6e+02,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|2.9e+03 R_Transcript_152854:92-2119(+)
ATGAAGATTTCAACTTCCTTCTTAAATAAAAAAAAAAGAACACACAGCTTGGAGTTGCAACAAACACTGGTTTACTTGCCAATTGCCATCTGGTTTGGTATGTTAAAACAGAGCATCCTTTACCGCCAAAACCGATTTCTATGCCTTCAAGCAGCTCTACCCATCACCGAACCCGAATACCCGATAACCAGCACCATCACCAAATGGAACCTTCAGTTAAGGGAGCTCTCAAAACAAAACCAATTCACAAAGGCACTTCATTTATTCCTTCAAATACTCCGATCAAATGTCTCTCCTAATACCTTTACATTCCCCTTCATCATCAAATCCTGTGCCTCTCTTTCTCACCTTTCTACTGGTCAACAGGTTCATTCCCATGTTATTCGAACTGGGTGTTGCTCAGATACGTTTGTTAGAACGTCTTTGATTTCTTTGTACTGTAAAAGTTCTCTGGTTGGCAGTGCACGCCAGGTGTTCGACGAAAGTCCCCAGCCAATTGAGCAGCGACCCACTGTCTGTTACAACGCTCTGATTTCTGGGTACACAGCGAAGTCCAGGGTTTTTGACGGGGTGTCGTTGTTTAACATGATGAGGCTAGTGGGTGTTTCTTATGATGCTGTCACCATGCTTGGGCTGCTTCCTGTTTGTAGTGTTCCAATGCATTTGAACCTTGGGATGTCTCTACATGGGTGTAATGTTAGGTGCGGTCTGATTAATGATGTTGCTGTTGGGAATTGTTTGCTTACCATGTACATTCGATGTGGATCAGTTGAGTATGCTCATAGATTGTTTAGTGAGATTCCTGAGAAGGGTTTGATCACGTTGAACGCGATGATTAGTGGCTACGCGCAAAATGGGTTGACTTCTCATGTTTTGGATCTTTATCATGAGATGGGAGCTTCTGGGATTCGTCCTGATGCTGTAACATTGCTCGGGGTTTTATCCTCTTGTGCATACCTTGGTGCTCGTGGTGTTGGTTGTGAGGTAGAAAAGCAAGTGGAGAAGTTGGGGTATGGTTCAAATGTCTTCCTGAAGAATGCACTCATTAATATGCATGCTAGATGTGGTAACTTGGTTAAGGCTCGCGCTATATTTGATGAGACGCCTGATAAAAGCTTGGTGACATGGACGGCTATCATTGGTGGTTATGGTTTAAATGGACATGGAGAGATTGCTGTGGAGTTGTTTGATGAGATGATTAGGAGTGGAATTCGCCCTGATGGAGCAGTTTTTGTTAGTGTATTGGCTGCTTGTAGTCATGCAGGGCTAACTGATAAAGGTTTAAGTTATTTCTACTCGATAGAGAGGGACTACAGGTTGCAGCCTGAGAGAGAGCATTATGCTTGTATGGTCGATCTTCTAGGCAGGGCTGGTCGCCTAAGGGAAGCTTATGAGCTCATCTTGTCAATGCCAATGCAACCAGATGCAGCTGTGTGGGGAGCTCTTTTGGGTGCTTGTAAGATTCATAAAAATGTGGAGCTGGCTGAGTTGGCTTTTGAGAGAATTCTTGAGATTGAACCCACAAATATTGGGTACTATGTCTTGTTATCAAACATTTACTTAGATGCTGAGAACATGGACGGTGTAAGAAACGTCCGAGTGATGATGAGAGGACTGAAGCGTAGAAAAGAGCCTGGTTACAGTTACGTTGATCATGAAGGGAGGGTTCATATGTTCTTGGCTGGGGATAGGTCTCATCCTCAAATGAATGAGATCTATGGAATGCTGGGCAGGTTAGAGGACTCAATAGAGGTGCTTGGATTTAGAAAGGGAAATCAAGAGGGTGAAACTGAGTTGGCTGCCAGTGGCTGCAGAGTGCACAGCGAAAGGTTGGCAATTGCATTCGGGCTTCTCAACACGATGCCTGGGACAGATATTGTTGTGATTAAGAATCTTCGAGTATGTGAAGACTGTCATGTGTTTATTAAGCTAGTTAGCAAGGTTGTGGACCGGCAATTCATTGTCAGAGATGCAACTCGTTTTCATCACTTCAAAAGTGGATCATGCTCTTGCAAAGATTACTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_152854.p1 GENE.R_Transcript_152854~~R_Transcript_152854.p1 ORF type:complete len:676 (+),score=107.72,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|0.073,PPR_2|PF13041.2|2.3e-08,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|1.1e+04,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.061,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|0.052,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|4.7,PPR|PF01535.16|0.084,PPR|PF01535.16|69,PPR|PF01535.16|2.3e+03,DYW_deaminase|PF14432.2|2.1e-27,PPR_1|PF12854.3|2.4e+02,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|3.5e+02,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|5.4e+02,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.00056,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|92,PPR_3|PF13812.2|65,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.085,PPR_3|PF13812.2|9.7,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|4.6e+02,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|2.9e+03 R_Transcript_152854:92-2119(+)
MKISTSFLNKKKRTHSLELQQTLVYLPIAIWFGMLKQSILYRQNRFLCLQAALPITEPEYPITSTITKWNLQLRELSKQNQFTKALHLFLQILRSNVSPNTFTFPFIIKSCASLSHLSTGQQVHSHVIRTGCCSDTFVRTSLISLYCKSSLVGSARQVFDESPQPIEQRPTVCYNALISGYTAKSRVFDGVSLFNMMRLVGVSYDAVTMLGLLPVCSVPMHLNLGMSLHGCNVRCGLINDVAVGNCLLTMYIRCGSVEYAHRLFSEIPEKGLITLNAMISGYAQNGLTSHVLDLYHEMGASGIRPDAVTLLGVLSSCAYLGARGVGCEVEKQVEKLGYGSNVFLKNALINMHARCGNLVKARAIFDETPDKSLVTWTAIIGGYGLNGHGEIAVELFDEMIRSGIRPDGAVFVSVLAACSHAGLTDKGLSYFYSIERDYRLQPEREHYACMVDLLGRAGRLREAYELILSMPMQPDAAVWGALLGACKIHKNVELAELAFERILEIEPTNIGYYVLLSNIYLDAENMDGVRNVRVMMRGLKRRKEPGYSYVDHEGRVHMFLAGDRSHPQMNEIYGMLGRLEDSIEVLGFRKGNQEGETELAASGCRVHSERLAIAFGLLNTMPGTDIVVIKNLRVCEDCHVFIKLVSKVVDRQFIVRDATRFHHFKSGSCSCKDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST