Transcript Information: R_Transcript_15288.p2


Annotated TAIR IDAT3G51040.1
Annotated Gene NameRTE1-Homolog
Annotated Gene Symbol(s)RTH
Annotation TypeOrtholog
Chromosome Positionchr3:18952281-18953060 | Reverse length=231
E-Value2E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.917624212761
Replicate 219.451118134579
Replicate 319.931836609639
Condition 2: 8 Hour
Replicate 115.475914641982
Replicate 221.876880069731
Replicate 325.223666706252
Condition 3: 24 Hour
Replicate 124.150420590182
Replicate 221.29144040086
Replicate 326.246295230608


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15288.p2 GENE.R_Transcript_15288~~R_Transcript_15288.p2 ORF type:complete len:231 (+),score=25.44,DUF778|PF05608.8|2.6e-22,DUF778|PF05608.8|5.3e-19 R_Transcript_15288:266-958(+)
ATGGCATCAGATGCAGACTCTGAGAAGCAGCAAATGGTCGGTGGAAATTTTCCAGAAGCTATGCAAATTGACCCAAAAAGAGCGCGATTCCCATTCTGTATTGTGTGGACACCACTACCTCTTCTTTCATGGCTGATTCCTTTCATTGGACACATTGGAATATGCAGACAGGATGGTGTAATATTGGACTTTGCAGGCCCCAATTTTGTGTCGGTAGATAACTTTGCCTTTGGTGCAGTTACTAGATACATGCGAATAGATGAAAAGCTATGCCGAGCGATTGCCCCCTTGACTGCCCGCCTAAATTTAAATGAGCAGAATCGTAGTGGAGCTGAAGGGGAGATACGGACTTGGGATGATGCACTGCGGAAAAGCACACAAGAATTCCAACATCGTTCATACAATATTTTGACTTGCAATTGTCATTCATTTGTGGCGCACAATCTAAATCGTCTGGGTTTCAATGGTGGCCGATGGAACGTGGTTAATCTTGCTATTCTGATGCTCTTAAAGGGTCAGTGGGTGGACAAAAGATCAATATTGAAATCTTACCTACCGTTTGTCATAGTATTTCCAATGGGTCTTGCTCTTGGAGGATGGACTTTCCTAGAATTTTGGGCTGCATTTTTGGTCCTCCTTGTTGGTTGGTTTTTTATTGGTTCTTATGGTTTCCAAGGTTTGATCCAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15288.p2 GENE.R_Transcript_15288~~R_Transcript_15288.p2 ORF type:complete len:231 (+),score=25.44,DUF778|PF05608.8|2.6e-22,DUF778|PF05608.8|5.3e-19 R_Transcript_15288:266-958(+)
MASDADSEKQQMVGGNFPEAMQIDPKRARFPFCIVWTPLPLLSWLIPFIGHIGICRQDGVILDFAGPNFVSVDNFAFGAVTRYMRIDEKLCRAIAPLTARLNLNEQNRSGAEGEIRTWDDALRKSTQEFQHRSYNILTCNCHSFVAHNLNRLGFNGGRWNVVNLAILMLLKGQWVDKRSILKSYLPFVIVFPMGLALGGWTFLEFWAAFLVLLVGWFFIGSYGFQGLIQL*

Click here to download the sequence:
Link to NCBI Protein BLAST