Transcript Information: R_Transcript_15289.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value8E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.861271100952
Replicate 210.471839054745
Replicate 313.146974710574
Condition 2: 8 Hour
Replicate 16.3209125051786
Replicate 23.6987924850081
Replicate 36.3234934241448
Condition 3: 24 Hour
Replicate 19.7239835124862
Replicate 212.105518037685
Replicate 37.5153271731953


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15289.p1 GENE.R_Transcript_15289~~R_Transcript_15289.p1 ORF type:complete len:399 (+),score=41.16,Glyco_hydro_28|PF00295.13|2.4e-82,Pectate_lyase_3|PF12708.3|6.9e-12,Pectate_lyase_3|PF12708.3|1.4e+02 R_Transcript_15289:28-1224(+)
ATGAAAGCAACACTCCTTGTTCTTGTCATTGTCACACTATCTTTTCTACCAACACCATTGACTAGGGCCGCCACCTACGATGTGATGGCCCTAGGGGCAAAACCCGATGGACTAACAGACTCATCCCAGGCATTCTTAGCTGCCTGGGATGCCGCCTGTAACTCGTTGGGCCGCCAAACAATCTACGTCCCATCGGGACGCTACCTCATTGGAAAACCCATCACCTTTTCCGGGGCAGGTGGTGGGAGATATTGTAAGAACAATAGAGTTATTATCATCATTCGAGGTACCCTTGTGGCCCCAGCTAATTACCTAGCTCTTGGGAACGCCAACATGTGGATTTCTTTTGTTAATGTTAATGGAGTTATCATCACTGGTGGAGTATTTGACGGTCAAGGTGATGGGTTGTGGGCTTGTAAGATGTCCGGCAAGGGTGGCTGCCCTCGCGGTGTTTCAAGCCTTAGCTTCCAAAATTCGATGAACGTGGTAGTTAGCAGGATAACATCTTTAAACAGCCAATTGTTCCACATTGTTATCAATGGCTGCAAAAATGTGAAAGTCCAAGGCGTGAGAATCACAGCTCCGGATACAAGCCCTAACACTGATGGGATTCATGTTCAAAGATCATCTGGTGTCACCATTCAGACTTCTATTATTGGCACTGGTGATGACTGCATTTCAATTGGTCCTGGCACCTCCAACTTGTGGATGGAGAACATCAAATGTGGACCTGGTCATGGTATTAGCATTGGAAGTCTAGGAAGAAATCTAGACGAGGCCGGAGTACAAAACGTTACAGTGAACAGAGCAACATTTGTTGGTACTCAATATGGAGTGCGGATCAAGACTTGGGCAAGACCAAGTTATAGCTTTGTAAAGGATGTGGTGTACCAACACATTACTATGGTGAATGCACGAAATCCCATCATAATTGATCAAAATTATTGCCCTAGTAATGTGGCTTGCCCTAATCAGGTTTCTGGTGTGGCGGTAAGTGGTGTAAAGTATAAAGATATTCAAGGATCATCAGCAACAGCAGTTGCAGTGAATTTTGATTGTAGCTCAAGCTATCATTGCACAGGTATAAGGCTAGAGAATGTGAACCTCACCTATAACAACAAAAAAGCCTCCTCAACTTGTGCAAATGCAGTTGGATCAGCATCAGGGGTAGTTCAGCCTCAAAGCTGCTTGTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15289.p1 GENE.R_Transcript_15289~~R_Transcript_15289.p1 ORF type:complete len:399 (+),score=41.16,Glyco_hydro_28|PF00295.13|2.4e-82,Pectate_lyase_3|PF12708.3|6.9e-12,Pectate_lyase_3|PF12708.3|1.4e+02 R_Transcript_15289:28-1224(+)
MKATLLVLVIVTLSFLPTPLTRAATYDVMALGAKPDGLTDSSQAFLAAWDAACNSLGRQTIYVPSGRYLIGKPITFSGAGGGRYCKNNRVIIIIRGTLVAPANYLALGNANMWISFVNVNGVIITGGVFDGQGDGLWACKMSGKGGCPRGVSSLSFQNSMNVVVSRITSLNSQLFHIVINGCKNVKVQGVRITAPDTSPNTDGIHVQRSSGVTIQTSIIGTGDDCISIGPGTSNLWMENIKCGPGHGISIGSLGRNLDEAGVQNVTVNRATFVGTQYGVRIKTWARPSYSFVKDVVYQHITMVNARNPIIIDQNYCPSNVACPNQVSGVAVSGVKYKDIQGSSATAVAVNFDCSSSYHCTGIRLENVNLTYNNKKASSTCANAVGSASGVVQPQSCLY*

Click here to download the sequence:
Link to NCBI Protein BLAST