Transcript Information: R_Transcript_15290.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value2E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.727250690511
Replicate 28.0234001590816
Replicate 311.02706474852
Condition 2: 8 Hour
Replicate 112.212552988576
Replicate 28.1009646372533
Replicate 312.476417225427
Condition 3: 24 Hour
Replicate 121.419691110712
Replicate 224.02545571455
Replicate 316.510824379198


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15290.p1 GENE.R_Transcript_15290~~R_Transcript_15290.p1 ORF type:complete len:403 (+),score=29.67,Glyco_hydro_28|PF00295.13|2.6e-80,Pectate_lyase_3|PF12708.3|1.9e-10,Pectate_lyase_3|PF12708.3|1.6e+03 R_Transcript_15290:74-1282(+)
ATGAGAGCAGCACTCACACTTCTCTCTCCCTTCTTCTTCTTCTTCACATTCTTCGCCCTCCCCGCTCAGGCCAGGCCCACCTACGACGTGACGACGCTCGGAGCCAGGCCCAACGGGAGGACGGACTCCACCAAGGCCTTCCTGAGCGCCTGGCACGCTGCGTGTGGGTCGACGGGTCGGCCAACCATCTACGTCCCGACGGGCCGGTTTTTGATCCGGAATGCCATCACATTTTCCGGGGCTGGGGGTGGGAGGAAATGCAAGAACAAGGGTGTTGATTTCATAATCAAAGGCACCCTTGTGGCCCCGTCCGACTTCCGAGCCCTCGGAAAGCATGCCACGTGGATTTCTTTCATTAATGTCGACGGTGTTACGATCTCGGGTGACGGGGTTTTGGACGGCCAGGGTGCCGGGTTGTGGGCTTGTAAGAAGTCCGGCAAGGGCGGGTGCCCAGGTGGTGTTACAAACCTAAGCTTCACAAATGCGATGAACATAGTGATAAAGAGGCTAACATCTTTAAACAGCCAATTGTACCACATAGTTTTTAATGGATGCAAAAACGTCAAAGTGCAAGGCGTAAAAGTGTCAGCTTCGGGTGCAAGCCCTAACACAGATGGGATTCACGTACAGTTTTCAACGGGTGTGACAATTCAAAGCACTCATATTGGCACCGGTGATGATTGTATTTCTATTGGTGCTGGCACTACTAACATGTGGATGGAGAACATCATTTGTGGACCTGGTCATGGTATCAGCATTGGAAGTCTAGGAAAGGATCTAAATGAGCCTGGAGTGCAAAATATAACAGTGAAAACTGCAACATTTGTTGGTACTCAAAATGGAGTGCGCATCAAGTCTTGGGGAAGACCAAGTAATGGCTTTGTGAGGGATGTGTTGTTTCAACACATTACCATGGTGAATGCCCAAAATCCCATTATCATTGACCAAAATTACTGCCCTGGTAATAAGGGTTGCCCTGGACAGGTTTCTGGAGTGGGAATAAGTGACATAACATATCAAGATATTCATGGATCATCAGCCACACAAATAGCAGTGAAATTTGATTGCAGCTCAAAAAGTCATTGTAGAGACATTAGACTTGAGAATGTAAAGCTGACTTACAACAATGAAGCAGCCACCTCAACTTGTAACAATGCTCTTGGATTCACCTCCGGCTTAGTTCAGCCTAAAAGCTGCTTGTACAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15290.p1 GENE.R_Transcript_15290~~R_Transcript_15290.p1 ORF type:complete len:403 (+),score=29.67,Glyco_hydro_28|PF00295.13|2.6e-80,Pectate_lyase_3|PF12708.3|1.9e-10,Pectate_lyase_3|PF12708.3|1.6e+03 R_Transcript_15290:74-1282(+)
MRAALTLLSPFFFFFTFFALPAQARPTYDVTTLGARPNGRTDSTKAFLSAWHAACGSTGRPTIYVPTGRFLIRNAITFSGAGGGRKCKNKGVDFIIKGTLVAPSDFRALGKHATWISFINVDGVTISGDGVLDGQGAGLWACKKSGKGGCPGGVTNLSFTNAMNIVIKRLTSLNSQLYHIVFNGCKNVKVQGVKVSASGASPNTDGIHVQFSTGVTIQSTHIGTGDDCISIGAGTTNMWMENIICGPGHGISIGSLGKDLNEPGVQNITVKTATFVGTQNGVRIKSWGRPSNGFVRDVLFQHITMVNAQNPIIIDQNYCPGNKGCPGQVSGVGISDITYQDIHGSSATQIAVKFDCSSKSHCRDIRLENVKLTYNNEAATSTCNNALGFTSGLVQPKSCLYN*

Click here to download the sequence:
Link to NCBI Protein BLAST