Transcript Information: R_Transcript_15292.p2


Annotated TAIR IDAT3G51040.1
Annotated Gene NameRTE1-Homolog
Annotated Gene Symbol(s)RTH
Annotation TypeHomolog
Chromosome Positionchr3:18952281-18953060 | Reverse length=231
E-Value5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7294147222009
Replicate 22.4528388336797
Replicate 34.8168373449853
Condition 2: 8 Hour
Replicate 14.2335373974209
Replicate 23.8661337762797
Replicate 32.2901564801423
Condition 3: 24 Hour
Replicate 12.8965457717197
Replicate 25.6684076587932
Replicate 32.0455798772801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15292.p2 GENE.R_Transcript_15292~~R_Transcript_15292.p2 ORF type:complete len:214 (+),score=25.40,DUF778|PF05608.8|1.4e-20,DUF778|PF05608.8|9.7e-19 R_Transcript_15292:261-902(+)
ATGGCATCAGATGCAGACTCTGAGAAGCAGCAAATGGTCGGTGGAAATTTTCCAGAAGCTATGCAAATTGACCCAAAAAGAGCGCGATTCCCATTCTGTATTGTGTGGACACCACTACCTCTTCTTTCATGGCTGATTCCTTTCATTGGACACATTGGAATATGCAGACAGGATGGTGTAATATTGGACTTTGCAGGCCCCAATTTTGTGTCGGTAGATAACTTTGCCTTTGGTGCAGTTACTAGAAACATACGAATAGATGAAAAGAATCGTAGTGGAGCTGAAGGGGAGATACGGACTTGGGATGATGCACTGCGGAAAAGCACACAAGAATTCCAACATCGTTCATACAATATTTTGACTTGCAATTGTCATTCATTTGTGGCGCACAATCTAAATCGTCTGGGTTTCAATGGTGGCCGATGGAACGTGGTTAATCTTGCTATTCTGATGCTCTTAAAGGGTCAGTGGGTGGACAAAAGATCAATATTGAAATCTTACCTACCGTTTGTCATAGTATTTCCAATGGGTCTTGCTCTTGGAGGATGGACTTTCCTAGAATTTTGGGCTGCATTTTTGGTCCTCCTTGTTGGTTGGTTTTTTATTGGTTCTTATGGTTTCCAAGGTTTGATCCAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15292.p2 GENE.R_Transcript_15292~~R_Transcript_15292.p2 ORF type:complete len:214 (+),score=25.40,DUF778|PF05608.8|1.4e-20,DUF778|PF05608.8|9.7e-19 R_Transcript_15292:261-902(+)
MASDADSEKQQMVGGNFPEAMQIDPKRARFPFCIVWTPLPLLSWLIPFIGHIGICRQDGVILDFAGPNFVSVDNFAFGAVTRNIRIDEKNRSGAEGEIRTWDDALRKSTQEFQHRSYNILTCNCHSFVAHNLNRLGFNGGRWNVVNLAILMLLKGQWVDKRSILKSYLPFVIVFPMGLALGGWTFLEFWAAFLVLLVGWFFIGSYGFQGLIQL*

Click here to download the sequence:
Link to NCBI Protein BLAST