Transcript Information: R_Transcript_15293.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value4E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4758882864156
Replicate 23.2544265645262
Replicate 33.0924095754806
Condition 2: 8 Hour
Replicate 14.0401677162955
Replicate 23.7454477083986
Replicate 35.7631363719729
Condition 3: 24 Hour
Replicate 16.9447366863805
Replicate 27.6090643172492
Replicate 36.1285573123312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_15293.p1 GENE.R_Transcript_15293~~R_Transcript_15293.p1 ORF type:complete len:400 (+),score=49.78,Glyco_hydro_28|PF00295.13|6.3e-83,Pectate_lyase_3|PF12708.3|2.8e-11,Pectate_lyase_3|PF12708.3|3.3e+02 R_Transcript_15293:28-1227(+)
ATGAAAGCAACACTCCTTGTTCTTGTCATTGTCACACTATCTTTTCTACCAACACCATTGACTAGGGCCGCCACCTACGATGTGATGGCCCTAGGGGCAAAACCCGATGGACTAACAGACTCATCCCAGGCATTCTTAGCTGCCTGGGATGCCGCCTGTAACTCGTTGGGCCGCCAAACAATCTACGTCCCATCGGGACGCTACCTCATTGGAAAACCCATCACCTTTTCCGGGGCAGGTGGTGGGAGATATTGTAAGAACAATAGAGTTATTATCATCATTCGAGGTACCCTTGTGGCCCCAGCTAATTACCTAGCTCTTGGGAACGCCAACATGTGGATTTCTTTTGTTAATGTTAATGGAGTTATCATCACTGGTGGAGTATTTGACGGTCAAGGTGATGGGTTGTGGGCTTGTAAGATGTCCGGCAAGGGTGGCTGCCCTCGCGGTGTTTCAAGCCTTAGCTTCCAAAATTCGATGAACGTGGTAGTTAGCAGGATAACATCTTTAAACAGCCAATTGTTCCACATTGTTATCAATGGCTGCAAAAATGTGAAAGTCCAAGGCGTGAGAATCACAGCTCCGGATACAAGCCCTAACACTGATGGGATTCATGTTCAAAGATCATCTGGTGTCACCATTCAGACTTCTATTATTGGCACTGGTGATGACTGCATTTCAATTGGTCCTGGCACCTCCAACTTGTGGATGGAGAACATCAAATGTGGACCTGGTCATGGTATTAGCATTGGAAGTCTGGGAAAGGATCTAAATGAGCCTGGAGTGCAAAATATAACAGTGAAAACTGCAACATTTGTTGGTACTCAAAATGGAGTGCGCATCAAGTCTTGGGGAAGACCAAGTAATGGCTTTGTGAGGGATGTGTTGTTTCAACACATTACCATGGTGAATGCCCAAAATCCCATTATCATTGACCAAAATTACTGCCCTGGTAATAAGGGTTGCCCTGGACAGGTTTCTGGAGTGGGAATAAGTGACATAACATATCAAGATATTCATGGATCATCAGCCACACAAATAGCAGTGAAATTTGATTGCAGCTCAAAAAGTCATTGTAGAGACATTAGACTTGAGAATGTAAAGCTAACCCACAACAATGAAGCAGCCACCTCAGCTTGTAACAATGCTCTTGGATTCACCTCCGGCTTAGTTCAGCCTAAAAGCTGCTTGTACAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_15293.p1 GENE.R_Transcript_15293~~R_Transcript_15293.p1 ORF type:complete len:400 (+),score=49.78,Glyco_hydro_28|PF00295.13|6.3e-83,Pectate_lyase_3|PF12708.3|2.8e-11,Pectate_lyase_3|PF12708.3|3.3e+02 R_Transcript_15293:28-1227(+)
MKATLLVLVIVTLSFLPTPLTRAATYDVMALGAKPDGLTDSSQAFLAAWDAACNSLGRQTIYVPSGRYLIGKPITFSGAGGGRYCKNNRVIIIIRGTLVAPANYLALGNANMWISFVNVNGVIITGGVFDGQGDGLWACKMSGKGGCPRGVSSLSFQNSMNVVVSRITSLNSQLFHIVINGCKNVKVQGVRITAPDTSPNTDGIHVQRSSGVTIQTSIIGTGDDCISIGPGTSNLWMENIKCGPGHGISIGSLGKDLNEPGVQNITVKTATFVGTQNGVRIKSWGRPSNGFVRDVLFQHITMVNAQNPIIIDQNYCPGNKGCPGQVSGVGISDITYQDIHGSSATQIAVKFDCSSKSHCRDIRLENVKLTHNNEAATSACNNALGFTSGLVQPKSCLYN*

Click here to download the sequence:
Link to NCBI Protein BLAST