Transcript Information: R_Transcript_153034.p1


Annotated TAIR IDAT2G35130.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14807589-14810072 | Reverse length=613
E-Value1.6E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1965512909286
Replicate 22.2496036160319
Replicate 32.5565555352849
Condition 2: 8 Hour
Replicate 13.5526366552923
Replicate 24.4921414413096
Replicate 35.3482424149355
Condition 3: 24 Hour
Replicate 14.1508535389376
Replicate 25.119970813884
Replicate 33.126814955271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_153034.p1 GENE.R_Transcript_153034~~R_Transcript_153034.p1 ORF type:complete len:448 (+),score=85.52,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.0036,PPR_2|PF13041.2|4e-11,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|2.2e-13,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|3.1e-09,PPR|PF01535.16|0.0032,PPR|PF01535.16|0.00018,PPR|PF01535.16|0.00025,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|0.0006,PPR|PF01535.16|0.017,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|7.6e+03,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|10,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|0.00093,PPR_1|PF12854.3|2.1e-09,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|1.8,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|0.0085,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.00032,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.097,PPR_3|PF13812.2|8.1e+02,TPR_16|PF13432.2|3.9e+02,TPR_16|PF13432.2|0.0053,TPR_16|PF13432.2|3.9,TPR_16|PF13432.2|8.8e+03,TPR_16|PF13432.2|8.2e+02,ECSIT|PF06239.7|6.5e+02,ECSIT|PF06239.7|1e+03,ECSIT|PF06239.7|1.1,ECSIT|PF06239.7|2e+02,ECSIT|PF06239.7|2.5e+02,ECSIT|PF06239.7|73,ECSIT|PF06239.7|20,ECSIT|PF06239.7|8.3,TPR_14|PF13428.2|5.3e+02,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|88,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|74,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|4.4e+02,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|4.3e+02 R_Transcript_153034:782-2125(+)
ATGAACAAAAATTGGGATCCAATTGTGGTGCTATGTCAATGGGTACTGTATCGGAGCTCCTTCCAACCAGATATCATGTGCTACAATTTGATGATTGATGCTTTTGGACAAAAATTACAGTATATGAAGGCAGAGTCCACATATTTAGAACTTCTAGAGGCTGGTTGCATCCCTACTGAGGATACTTATGCGCTTCTTTTGAGGTCGTACTGTGCGTCTAGATTGTTCACCAAAGCTGAAGCCATTTTCTCTGAAATGCGAAAATTTGGCCTGCCTTCGAGTGCCAATGTATACAATGCATATATAGAAGGATTGATAAAGGGAGGAAACTACCAAAAGTCATTCGAGATATTTGAGAGAATGAGAAGGGAGCACTGCAAACCAACAGCAGAAACTTACACAATTTTGATAAATTTATACGGGAAGGAAAATAAATCTTATATGGCTCTCAAGCTGTTCAATGAGATGACAACCCAGAAGTGCAAGCCAAATATCTGCACTTACACTGCACTAATTAATGCTTTTGCAAGGGATGGAAATTGTGAGAAAGCAGAGGAGATATTCGAGCTGCTACAAGAAGCTGGTCTTGAGCCTGATGTCTATGCTTATAATGCACTTATGGAGGCTTACAGCCGTGCAGGGTTCCCTAATGGTGCTGCAGAAATTTTTTCACTTATGCAACACATGGGATGCGAACCAGACAAGGCATCATACAACATCATGGTAGATGCCTATGGAAGAGCTGGTTTGGTCGAGGATGCAGAAGAAATGTTTCAACAGCTGAAGCAGCGTGGCATGGTTCCGACAATGAAGTCGCACATGCTGCTACTTTGTGCGTACTCCAAAGCAGGAAACGTTGCCAAGTGCGAGGAATTTGTGAACGAGATGATCGAGTCTGGTGTGCAACCAGACACATACGTCCTCAATTGCATGCTGAATCTATATGGTCGGTTAGGCCATTTCGAAAAGATGGAGCAAGTTTTGAGTGCAATGGAAGGGGAGACATATGCAGCTGATTTAAGCACATATAACATATTGATCAACATTTACGGACGAGCTGGATACTTAGAGAAAATGGAGGAGCTGTTCCATTCACTTGATGCTCGGAATATGAAACCTAATGTGGTGACTTGGACTTCGCGCCTAGGAGCATACTCGAGAAAGAAGCAGTACAAGACATGCTTGGAAATATTTGAGCAGATGATTGATGCTGGGTGTTTCCCTGATGGAGGAACTGCAAAAGTTCTTCTTTCGTCGTGTTCGAGTGAAGATCAGAGAGAGCAGGTTACTACAATTCTTAGAACAATGCATAAGGATGTTAGAACTATTCAGGATACTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_153034.p1 GENE.R_Transcript_153034~~R_Transcript_153034.p1 ORF type:complete len:448 (+),score=85.52,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.0036,PPR_2|PF13041.2|4e-11,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|9.3e-12,PPR_2|PF13041.2|2.2e-13,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|6e-06,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|6.1e-08,PPR_2|PF13041.2|3.1e-09,PPR|PF01535.16|0.0032,PPR|PF01535.16|0.00018,PPR|PF01535.16|0.00025,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.7e-08,PPR|PF01535.16|0.0006,PPR|PF01535.16|0.017,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|7.6e+03,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|10,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|0.00093,PPR_1|PF12854.3|2.1e-09,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|1.8,PPR_3|PF13812.2|8.9e+02,PPR_3|PF13812.2|0.0085,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|0.00032,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.097,PPR_3|PF13812.2|8.1e+02,TPR_16|PF13432.2|3.9e+02,TPR_16|PF13432.2|0.0053,TPR_16|PF13432.2|3.9,TPR_16|PF13432.2|8.8e+03,TPR_16|PF13432.2|8.2e+02,ECSIT|PF06239.7|6.5e+02,ECSIT|PF06239.7|1e+03,ECSIT|PF06239.7|1.1,ECSIT|PF06239.7|2e+02,ECSIT|PF06239.7|2.5e+02,ECSIT|PF06239.7|73,ECSIT|PF06239.7|20,ECSIT|PF06239.7|8.3,TPR_14|PF13428.2|5.3e+02,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|88,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|74,TPR_14|PF13428.2|3.3e+03,TPR_14|PF13428.2|4.4e+02,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|4.3e+02 R_Transcript_153034:782-2125(+)
MNKNWDPIVVLCQWVLYRSSFQPDIMCYNLMIDAFGQKLQYMKAESTYLELLEAGCIPTEDTYALLLRSYCASRLFTKAEAIFSEMRKFGLPSSANVYNAYIEGLIKGGNYQKSFEIFERMRREHCKPTAETYTILINLYGKENKSYMALKLFNEMTTQKCKPNICTYTALINAFARDGNCEKAEEIFELLQEAGLEPDVYAYNALMEAYSRAGFPNGAAEIFSLMQHMGCEPDKASYNIMVDAYGRAGLVEDAEEMFQQLKQRGMVPTMKSHMLLLCAYSKAGNVAKCEEFVNEMIESGVQPDTYVLNCMLNLYGRLGHFEKMEQVLSAMEGETYAADLSTYNILINIYGRAGYLEKMEELFHSLDARNMKPNVVTWTSRLGAYSRKKQYKTCLEIFEQMIDAGCFPDGGTAKVLLSSCSSEDQREQVTTILRTMHKDVRTIQDTN*

Click here to download the sequence:
Link to NCBI Protein BLAST